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LOCUS	    AY156737		     689 bp    DNA     linear	VRL 22-OCT-2002
DEFINITION  HIV-1 clone P4.BCM.RT from USA reverse transcriptase (pol) gene,
	    partial cds
ACCESSION   AY156737
VERSION     AY156737.1 GI:24209945
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 689)
            Show all sequences for reference 1
  AUTHORS   Metzker,M.L., Mindell,D.P., Liu,X.M., Ptak,R.G., Gibbs,R.A. and
	    Hillis,D.M.
  TITLE     Molecular evidence of HIV-1 transmission in a criminal case.
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (22), 14292-7 (2002)
  PUBMED    12388776
REFERENCE   2 (bases 1 to 689)
            Show all sequences for reference 2
  AUTHORS   Metzker,M.L., Liu,X.-M. and Gibbs,R.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-SEP-2002) Department of Molecular & Human Genetics,
	    Baylor College of Medicine, One Baylor Plaza, N1409, Houston, TX
	    77030, USA
COMMENT     There are 174 sequences in this group. A control group comprised of
	    28 individuals includes 26 env and 25 RT sequences taken in 1995.
	    Patient samples (66) include 51 env and 7 RT from 1995
	    (BCM,P01-50), 2 env and 6 RT from 1997 (MIC). Victim samples (57)
	    include 51 env and 2RT from 1995 (BCM,V01-50), and 2 env and 2 RT
	    from 1997 (MIC). This was a criminal case where a physician
	    intentionally infected the "victim" by intramuscular injection of
	    blood from the "patient". Victim was injected August, 1994 and
	    was seropositive in January, 1995.
FEATURES             Location/Qualifiers
     source	     1..689
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolation_source="whole blood PBMC"
		     /db_xref="taxon:11676"
		     /clone="P4.BCM.RT"
		     /country="USA: Lafayette, LA"
     gene	     <1..>689
		     /gene="pol"
     CDS	     <1..>689
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="AAN41465.1"
		     /db_xref="GI:24209946"
		     /translation="PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKE
		     GKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKK
		     KKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
		     QSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRIKIEELRQHLLKWGLTTPD
		     KKHQKEPPFLW"
BASE COUNT	282 a	 114 c	  135 g    158 t
ORIGIN
       1 cccataagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaaa 
      61 gttaaacaat ggccactgac agaagaaaaa ataaaagcat tagtagaaat ttgtacagaa 
     121 atggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta 
     181 tttgccataa agaaaaaaga cagtactaaa tggagaaaat tagtagattt cagagaactt 
     241 aataagagaa ctcaggactt ctgggaagtt caattaggaa taccacatcc tgcagggtta 
     301 aaaaagaaaa aatcagtaac agtgctggat gtgggtgatg catatttttc agttccctta 
     361 gataaagagt tcaggaagta tactgcattt accataccta gtataaacaa tgagacacca 
     421 gggattagat atcagtacaa tgtgcttcca cagggatgga aaggatcacc agcaatattc 
     481 caaagtagca tgacaaaaat cttagagcct tttagaaaac aaaatccaga catagttatc 
     541 tatcaataca tggatgatct gtatgtagga tctgacttag aaatagggca gcatagaata 
     601 aaaatagagg aactaagaca acatctgttg aagtggggac ttaccacacc agacaaaaaa 
     661 catcagaagg aacccccatt cctttggat
//
last modified: Tue May 31 10:56 2022


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