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LOCUS	    AM260278		    1806 bp    DNA     linear	VRL 02-FEB-2007
DEFINITION  Human immunodeficiency virus type 1 proviral partial gene for
	    gag-pol fusion polyprotein precursor, isolate 02BU.U0211
ACCESSION   AM260278
VERSION     AM260278.1 GI:124483003
KEYWORDS    gag polyprotein; gag-pol fusion; pol polyprotein.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1
            Show all sequences for reference 1
  AUTHORS   Vidal,N., Niyongabo,T., Nduwimana,J., Butel,C., Ndayiragije,A.,
	    Wakana,J., Nduwimana,M., Delaporte,E. and Peeters,M.
  TITLE     HIV Type 1 Diversity and Antiretroviral Drug Resistance Mutations
	    in Burundi
  JOURNAL   AIDS Res. Hum. Retroviruses 23 (1), 175-180 (2007)
  PUBMED    17263648
REFERENCE   2 (bases 1 to 1806)
            Show all sequences for reference 2
  AUTHORS   Vidal,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2006) Vidal N., UMR145, I.R.D, 911 avenue
	    Agropolis, 34394 Montpellier, FRANCE
FEATURES             Location/Qualifiers
     source	     1..1806
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="02BU.U0211"
		     /db_xref="taxon:11676"
		     /country="Burundi"
		     /note="subtype: C"
     CDS	     <1..>1806
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag-pol fusion polyprotein precursor"
		     /protein_id="CAK18291.1"
		     /db_xref="GI:124483004"
		     /translation="FFRENLAFLQGEAREFPSEQTRADSPTSREEQARADSPTSRELQ
		     VRGDNPLSEAGAERQGTLNFPQITLWQRPLVTIKVGGQIKEALLDTGADDTVLEEIKL
		     PGNWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCT
		     LNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEDMEKEGKITKIGPENP
		     YNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGD
		     AYFSVPLDENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPSIFQSSMTKILEPF
		     RTQNPDMVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLW
		     MGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAK
		     ALTDIVALTEEAELELAENREILREPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEP
		     FKNLKTGKYAKMRTAHTNDVKQLTEAVQKIAQESIIIWGKTPKFRLPIQKETWEAWWT
		     DYWQATWIPEWEFVNTPPLVKLWYQLEKEPIAGAEL"
BASE COUNT	691 a	 333 c	  401 g    381 t
ORIGIN
       1 ttttttaggg aaaatctggc cttcctacaa ggggaggcca gggaatttcc ttcagaacag 
      61 accagagccg acagccccac cagcagagag gaacaggcca gagccgacag ccccaccagc 
     121 agagagcttc aggttcgagg agacaacccc ctctccgaag caggagcaga gagacaagga 
     181 acccttaact tccctcaaat cactctttgg cagcgacccc ttgtcacaat aaaagtaggg 
     241 ggacagataa aagaagctct cttagacaca ggagcagatg atacagtatt agaagaaata 
     301 aaattgccag gaaattggaa accaaaaatg ataggaggaa ttggaggttt tatcaaagta 
     361 agacagtatg atcaaatact tatagaaatt tgtggaaaaa aggctatagg tacagtacta 
     421 gtaggaccta cacctgtcaa cataattgga agaaatatgt tgactcagct tggatgcaca 
     481 ctaaattttc caattagtcc cattgaaact gtaccagtaa aattaaaacc aggaatggat 
     541 ggcccaaagg tcaaacaatg gccattgaca gaagagaaaa taaaagcatt aacagcaatt 
     601 tgtgaagata tggagaagga aggaaaaatt acaaaaattg ggcctgaaaa tccatataac 
     661 actccagtat ttgccataaa aaagaaggat agtactaagt ggagaaaatt agtagatttc 
     721 agggaactca ataaaagaac tcaagacttt tgggaagttc aattaggaat accacaccca 
     781 gcagggttaa aaaagaaaaa atcagtgaca gtactggatg tgggggatgc atatttctca 
     841 gttcccttag atgaaaactt caggaaatat actgcattca ccatacctag tataaacaat 
     901 gaaacaccag ggattagata tcaatataat gtgcttccac agggatggaa aggatcacca 
     961 tcaatattcc agagtagcat gacaaaaatc ttagagccct ttaggacaca aaacccagac 
    1021 atggttatct atcaatatat ggatgacttg tatgtaggat ctgacttaga aatagggcaa 
    1081 catagagcaa aaatagaaga gttaagagag catctattga ggtggggatt taccacacca 
    1141 gacaagaaac atcagaaaga acctccattt ctttggatgg ggtatgaact ccatcctgac 
    1201 aaatggacag tacagcctat acagctgcca gaaaaggata gctggactgt caatgatata 
    1261 cagaagttag tgggaaaatt aaactgggca agtcagattt acccagggat taaagtaagg 
    1321 caactgtgta aactccttag gggagccaaa gcactaacag acatagtagc actgactgaa 
    1381 gaagcagaat tagaattggc agagaacagg gaaattctaa gagaaccagt acatggagtg 
    1441 tattatgacc catcgaaaga cttaatagct gaaatacaga aacagggaca tgatcaatgg 
    1501 acatatcaaa tttaccaaga accatttaaa aatctgaaaa cagggaaata tgcaaaaatg 
    1561 aggactgccc acactaatga tgtaaagcag ttaacagagg cagtgcaaaa aatagcccag 
    1621 gaaagcatta taatatgggg aaagactccc aagtttagat tacctatcca gaaagaaaca 
    1681 tgggaggcat ggtggacaga ctattggcaa gccacctgga ttcctgagtg ggagtttgtt 
    1741 aatacccctc ccctagtaaa gttatggtac cagctggaga aagaacccat agcaggagca 
    1801 gaactc
//
last modified: Tue May 31 10:56 2022


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