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LOCUS AM260278 1806 bp DNA linear VRL 02-FEB-2007
DEFINITION Human immunodeficiency virus type 1 proviral partial gene for
gag-pol fusion polyprotein precursor, isolate 02BU.U0211
ACCESSION AM260278
VERSION AM260278.1 GI:124483003
KEYWORDS gag polyprotein; gag-pol fusion; pol polyprotein.
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1
Show all sequences for reference 1
AUTHORS Vidal,N., Niyongabo,T., Nduwimana,J., Butel,C., Ndayiragije,A.,
Wakana,J., Nduwimana,M., Delaporte,E. and Peeters,M.
TITLE HIV Type 1 Diversity and Antiretroviral Drug Resistance Mutations
in Burundi
JOURNAL AIDS Res. Hum. Retroviruses 23 (1), 175-180 (2007)
PUBMED 17263648
REFERENCE 2 (bases 1 to 1806)
Show all sequences for reference 2
AUTHORS Vidal,N.
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2006) Vidal N., UMR145, I.R.D, 911 avenue
Agropolis, 34394 Montpellier, FRANCE
FEATURES Location/Qualifiers
source 1..1806
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="02BU.U0211"
/db_xref="taxon:11676"
/country="Burundi"
/note="subtype: C"
CDS <1..>1806
/codon_start="1"
/transl_table="1"
/product="gag-pol fusion polyprotein precursor"
/protein_id="CAK18291.1"
/db_xref="GI:124483004"
/translation="FFRENLAFLQGEAREFPSEQTRADSPTSREEQARADSPTSRELQ
VRGDNPLSEAGAERQGTLNFPQITLWQRPLVTIKVGGQIKEALLDTGADDTVLEEIKL
PGNWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCT
LNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEDMEKEGKITKIGPENP
YNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGD
AYFSVPLDENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPSIFQSSMTKILEPF
RTQNPDMVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLW
MGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAK
ALTDIVALTEEAELELAENREILREPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEP
FKNLKTGKYAKMRTAHTNDVKQLTEAVQKIAQESIIIWGKTPKFRLPIQKETWEAWWT
DYWQATWIPEWEFVNTPPLVKLWYQLEKEPIAGAEL"
BASE COUNT 691 a 333 c 401 g 381 t
ORIGIN
1 ttttttaggg aaaatctggc cttcctacaa ggggaggcca gggaatttcc ttcagaacag
61 accagagccg acagccccac cagcagagag gaacaggcca gagccgacag ccccaccagc
121 agagagcttc aggttcgagg agacaacccc ctctccgaag caggagcaga gagacaagga
181 acccttaact tccctcaaat cactctttgg cagcgacccc ttgtcacaat aaaagtaggg
241 ggacagataa aagaagctct cttagacaca ggagcagatg atacagtatt agaagaaata
301 aaattgccag gaaattggaa accaaaaatg ataggaggaa ttggaggttt tatcaaagta
361 agacagtatg atcaaatact tatagaaatt tgtggaaaaa aggctatagg tacagtacta
421 gtaggaccta cacctgtcaa cataattgga agaaatatgt tgactcagct tggatgcaca
481 ctaaattttc caattagtcc cattgaaact gtaccagtaa aattaaaacc aggaatggat
541 ggcccaaagg tcaaacaatg gccattgaca gaagagaaaa taaaagcatt aacagcaatt
601 tgtgaagata tggagaagga aggaaaaatt acaaaaattg ggcctgaaaa tccatataac
661 actccagtat ttgccataaa aaagaaggat agtactaagt ggagaaaatt agtagatttc
721 agggaactca ataaaagaac tcaagacttt tgggaagttc aattaggaat accacaccca
781 gcagggttaa aaaagaaaaa atcagtgaca gtactggatg tgggggatgc atatttctca
841 gttcccttag atgaaaactt caggaaatat actgcattca ccatacctag tataaacaat
901 gaaacaccag ggattagata tcaatataat gtgcttccac agggatggaa aggatcacca
961 tcaatattcc agagtagcat gacaaaaatc ttagagccct ttaggacaca aaacccagac
1021 atggttatct atcaatatat ggatgacttg tatgtaggat ctgacttaga aatagggcaa
1081 catagagcaa aaatagaaga gttaagagag catctattga ggtggggatt taccacacca
1141 gacaagaaac atcagaaaga acctccattt ctttggatgg ggtatgaact ccatcctgac
1201 aaatggacag tacagcctat acagctgcca gaaaaggata gctggactgt caatgatata
1261 cagaagttag tgggaaaatt aaactgggca agtcagattt acccagggat taaagtaagg
1321 caactgtgta aactccttag gggagccaaa gcactaacag acatagtagc actgactgaa
1381 gaagcagaat tagaattggc agagaacagg gaaattctaa gagaaccagt acatggagtg
1441 tattatgacc catcgaaaga cttaatagct gaaatacaga aacagggaca tgatcaatgg
1501 acatatcaaa tttaccaaga accatttaaa aatctgaaaa cagggaaata tgcaaaaatg
1561 aggactgccc acactaatga tgtaaagcag ttaacagagg cagtgcaaaa aatagcccag
1621 gaaagcatta taatatgggg aaagactccc aagtttagat tacctatcca gaaagaaaca
1681 tgggaggcat ggtggacaga ctattggcaa gccacctgga ttcctgagtg ggagtttgtt
1741 aatacccctc ccctagtaaa gttatggtac cagctggaga aagaacccat agcaggagca
1801 gaactc
//
last modified: Tue May 31 10:56 2022