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LOCUS	    AM260234		    1788 bp    DNA     linear	VRL 02-FEB-2007
DEFINITION  Human immunodeficiency virus type 1 proviral partial gene for
	    gag-pol fusion polyprotein precursor, isolate 02BU.U2025
ACCESSION   AM260234
VERSION     AM260234.1 GI:124482920
KEYWORDS    gag polyprotein; gag-pol fusion; pol polyprotein.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1
            Show all sequences for reference 1
  AUTHORS   Vidal,N., Niyongabo,T., Nduwimana,J., Butel,C., Ndayiragije,A.,
	    Wakana,J., Nduwimana,M., Delaporte,E. and Peeters,M.
  TITLE     HIV Type 1 Diversity and Antiretroviral Drug Resistance Mutations
	    in Burundi
  JOURNAL   AIDS Res. Hum. Retroviruses 23 (1), 175-180 (2007)
  PUBMED    17263648
REFERENCE   2 (bases 1 to 1788)
            Show all sequences for reference 2
  AUTHORS   Vidal,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2006) Vidal N., UMR145, I.R.D, 911 avenue
	    Agropolis, 34394 Montpellier, FRANCE
FEATURES             Location/Qualifiers
     source	     1..1788
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="02BU.U2025"
		     /db_xref="taxon:11676"
		     /country="Burundi"
		     /note="subtype: C"
     CDS	     <1..>1788
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag-pol fusion polyprotein precursor"
		     /protein_id="CAK18247.1"
		     /db_xref="GI:124482921"
		     /translation="FFRENLAFPQGEAREFPPEQTRANSPTSRELQVRGDNPLSEAGA
		     PLSDTGAERQEPLQGTLNCPQITLWQRPLVTIRVAGQLKEALLDTGADDTVLEEIKLP
		     GNWKPKMIGGIGGFIKVRQYDQITIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTL
		     NFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICEDMEKEGKISKIGPENPY
		     NTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDA
		     YFSVPLDESFRKYTAFTIPSXNNETPGVRYQYNVLPQGWKGSPXIFQSSMTKILEPFR
		     AQNPEIVIYQYMDDLYVGSDLEIGQHRAKIEKLREHLLRWGFTTPDKKHQKEPPFLWM
		     GYELHPDKWTVQPIQLPNKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKA
		     LTDVVPLTEEAELELAENREILKEPVHGVYYDPSKDLIAELQKQGNDQWTYQIYQEPF
		     KNLKTGKYAKMRTAHTNDVKQLTEAVQKIAQECIVIWGKTPKFRLPIQXETWETWWTD
		     YWQATWIPEWEFVNTPPLVKLWYQLETEPI"
BASE COUNT	678 a	 330 c	  390 g    378 t     12 other
ORIGIN
       1 ttttttaggg aaaatttggc cttcccacaa ggggaggcca gggaatttcc tccagagcag 
      61 accagagcca acagccccac cagcagagag cttcaagttc gaggagacaa ccccctctca 
     121 gaagcaggag cccccctctc tgacacagga gcagaaagac aagaacccct acagggaacc 
     181 cttaactgcc ctcaaatcac tctttggcag cgaccccttg tcacaataag agtagcggga 
     241 cagctaaagg aagctctctt agacacagga gcagatgata cagtgttaga agaaataaaa 
     301 ttaccaggaa attggaaacc aaaaatgata ggaggaattg gaggttttat caaagtaaga 
     361 cagtatgatc aaataactat agaaatatgt ggaaaaaagg ctataggtac agtactagta 
     421 ggacctacac ctgtcaacat aattggaaga aatatgttga ctcagcttgg atgcacacta 
     481 aattttccaa ttagtcctat tgaaactgta ccagtaaaat taaagccagg aatggatggc 
     541 ccaaaggtca aacaatggcc cttgacagaa gagaaaataa aagcattaac agagatttgt 
     601 gaagacatgg aaaaggaagg aaaaatttca aaaattgggc ctgaaaaccc atataacact 
     661 ccagtatttg ccataaaaaa gaaggacagt actaaatgga gaaaattagt agatttcagg 
     721 gaactcaata agaggactca agayttttgg gaagttcaat tagggatacc acacccagca 
     781 gggttaaaaa agaaaaaatc agtgacagta ctggatgtgg gggatgcata tttttcagtt 
     841 cctttagatg aaagcttcag gaaatatact gcattcacca tacctagtay aaacaatgaa 
     901 acaccagggg ttagatatca atataatgtg cttccwcagg gatggaaagg atcaccakca 
     961 atattccaga gtagcatgac aaaaatctta gagcccttta gggcacaaaa cccagaaata 
    1021 gtcatctatc aatatatgga tgacttgtat gtaggatctg acttagaaat agggcaacat 
    1081 agagcaaaaa tagagaagtt aagagaacat ctattgaggt gggggtttac cacaccagac 
    1141 aagaarcatc agaaagaacc tccatttctt tggatggggt atgaactcca tcctgacaaa 
    1201 tggacagtac agcctataca gctgccaaac aaggagagct ggactgtcaa tgatatacag 
    1261 aagttagtgg gaaaattaaa ctgggcaagt cagatttacc cagggattaa agtaagacaa 
    1321 ctgtgtaaac tccttagagg agccaaagca ctaacagayg tagtaccact gactgaagaa 
    1381 gcagaattag aattggcaga gaacagggaa attctaaaag aaccagtaca tggagtatat 
    1441 tatgayccat caaaagactt aatagctgaa ttacagaaac agggaaatga tcaatggaca 
    1501 tatcaaattt aycaagagcc atttaaraat ctgaaaacag ggaartatgc aaaaatgagg 
    1561 actgcccaca ctaatgatgt gaaacagtta acagaggcag tgcaaaaaat agcycaggaa 
    1621 tgcatagtaa tatggggaaa gactcctaaa tttagattac ccatccagar agaaacatgg 
    1681 gagacatggt ggacagacta ttggcaagcc acctggattc ctgagtggga gtttgttaat 
    1741 acccctcccc tagtaaagtt atggtaccag ctagagacag aacccata
//
last modified: Tue May 31 10:56 2022


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