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LOCUS	    AM260219		    1767 bp    DNA     linear	VRL 02-FEB-2007
DEFINITION  Human immunodeficiency virus type 1 proviral partial gene for
	    gag-pol fusion polyprotein precursor, isolate 02BU.U0118
ACCESSION   AM260219
VERSION     AM260219.1 GI:124482891
KEYWORDS    gag polyprotein; gag-pol fusion; pol polyprotein.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1
            Show all sequences for reference 1
  AUTHORS   Vidal,N., Niyongabo,T., Nduwimana,J., Butel,C., Ndayiragije,A.,
	    Wakana,J., Nduwimana,M., Delaporte,E. and Peeters,M.
  TITLE     HIV Type 1 Diversity and Antiretroviral Drug Resistance Mutations
	    in Burundi
  JOURNAL   AIDS Res. Hum. Retroviruses 23 (1), 175-180 (2007)
  PUBMED    17263648
REFERENCE   2 (bases 1 to 1767)
            Show all sequences for reference 2
  AUTHORS   Vidal,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2006) Vidal N., UMR145, I.R.D, 911 avenue
	    Agropolis, 34394 Montpellier, FRANCE
FEATURES             Location/Qualifiers
     source	     1..1767
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="02BU.U0118"
		     /db_xref="taxon:11676"
		     /country="Burundi"
		     /note="subtype: C"
     CDS	     <1..>1767
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag-pol fusion polyprotein precursor"
		     /protein_id="CAK18232.1"
		     /db_xref="GI:124482892"
		     /translation="FFRENLAFQQGEAREFPSEQTRANSPTSRANSPTSRELQVRGDS
		     PLLEAGADRQGALNFPQITLWQRPLVEIRVEGQLREALLDTGADDTVLEDINLPGKWK
		     PKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPI
		     SPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEDMEKEGKISRIGPENPYNTPV
		     FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSV
		     PLDEGFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTQNP
		     EIVIYQYMDDLYVGSDLEIGQHRAKIEELRKHLLRWGFTTPDKKHQKEPPFLWMGYEL
		     HPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDI
		     VSLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEPFKNLK
		     TGKYAKRRTAHTNDVKQLTEAVQKIALESIVIWGKTPKFRLPIQKETWEAWWTDYWQA
		     TWIPEWEFVNTPPLVKLWYQLEK"
BASE COUNT	670 a	 327 c	  393 g    377 t
ORIGIN
       1 ttttttaggg agaatttggc cttccaacaa ggggaggcca gggaatttcc ttcagagcag 
      61 accagagcca acagccccac cagtagagcc aacagcccca ccagcagaga gcttcaggtt 
     121 cgaggagaca gccccctcct cgaagcagga gccgacagac aaggagccct taatttccct 
     181 caaatcactc tttggcagcg accccttgtc gaaataagag tagagggaca gctaagagag 
     241 gctctcttag acacaggagc agatgacaca gtattagaag acataaattt gccaggaaaa 
     301 tggaaaccaa aaatgatagg gggaattgga ggttttatta aagtaagaca gtatgatcag 
     361 atacttatag aaatctgtgg aaaaaaggct ataggtacag tactagtagg acctacacct 
     421 gtcaacataa ttggaaggaa tatgttgact cagcttggat gcacactaaa ttttccaatt 
     481 agtcccattg aaactgtacc agtaaaatta aagccaggaa tggatggccc aaaagtcaaa 
     541 caatggccat tgacagaaga gaaaataaaa gcattaacag caatttgtga agatatggaa 
     601 aaggaaggaa aaatttcaag aattgggcct gaaaatccat ataacactcc agtatttgcc 
     661 ataaaaaaga aggacagtac taagtggaga aaattagtag atttcaggga actcaataaa 
     721 agaactcaag acttttggga agttcaatta gggataccac acccagcagg gttaaaaaag 
     781 aaaaaatcag tgacagtact ggatgtgggg gatgcatatt tctcagtccc tttagatgaa 
     841 ggcttcagga aatatactgc attcaccata cctagtacaa acaatgaaac accagggatt 
     901 agatatcaat ataatgtact tccacaggga tggaagggat caccagcaat attccagagt 
     961 agcatgacaa aaattttaga gccctttagg acacaaaacc cagaaatagt tatctaccaa 
    1021 tatatggatg acttgtatgt aggatctgat ttagaaatag ggcaacatag agcaaaaata 
    1081 gaggagttaa gaaaacatct attgaggtgg ggatttacca cacccgacaa gaaacatcaa 
    1141 aaagaaccgc catttctttg gatggggtat gaacttcatc ctgacaaatg gacagtacag 
    1201 cctatacagc tgccagaaaa ggatagctgg actgtcaatg atatacagaa gttagtagga 
    1261 aaattaaact gggcaagtca gatttaccca ggaattaaag taaagcaact gtgtaagctc 
    1321 cttaggggag ccaaagcact aacagacata gtatcattga ctgaagaagc agaattagaa 
    1381 ttggcagaga acagggaaat tctaaaagaa ccagtacatg gagtatatta tgacccctca 
    1441 aaagacttaa tagctgaaat acagaaacag gggcatgacc aatggacata tcaaatttac 
    1501 caagaaccat tcaaaaacct gaaaacaggg aagtatgcaa aaagaaggac tgcccacact 
    1561 aatgatgtaa aacagttaac agaggcagtg caaaagatag ccctggaaag catagtaata 
    1621 tggggaaaga ctcctaaatt tagattaccc atccagaaag aaacatggga ggcatggtgg 
    1681 acagactatt ggcaagccac ctggattcct gagtgggagt ttgttaatac ccctccccta 
    1741 gtaaagttat ggtaccagct ggaaaaa
//
last modified: Tue May 31 10:56 2022


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