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LOCUS AJ313397 1837 bp RNA linear VRL 15-APR-2005
DEFINITION Human immunodeficiency virus type 1 partial pol gene, genomic RNA,
isolate 00GAB-LBV15-01
ACCESSION AJ313397
VERSION AJ313397.1 GI:19069754
KEYWORDS pol gene; pol protein.
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1
Show all sequences for reference 1
AUTHORS Vergne,L., Malonga-Mouellet,G., Mistoul,I., Mavoungou,R.,
Mansaray,H., Peeters,M. and Delaporte,E.
TITLE Resistance to antiretroviral treatment in Gabon: need for
implementation of guidelines on antiretroviral therapy use and
HIV-1 drug resistance monitoring in developing countries
JOURNAL J. Acquir. Immune Defic. Syndr. 29 (2), 165-168 (2002)
PUBMED 11832686
REFERENCE 2 (bases 1 to 1837)
Show all sequences for reference 2
AUTHORS Vergne,L.
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2001) Vergne L., Retrovirus, Ird, 911, avenue
Agropolis, 34032 Montpellier Cedex 1, FRANCE
FEATURES Location/Qualifiers
source 1..1837
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="00GAB-LBV15-01"
/db_xref="taxon:11676"
/country="Gabon"
gene <54..>1837
/gene="pol"
CDS <54..>1837
/gene="pol"
/function="protease and RT"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="CAC86174.1"
/db_xref="GI:19069755"
/db_xref="GOA:Q8Q895"
/db_xref="HSSP:P04584"
/db_xref="InterPro:IPR000477"
/db_xref="InterPro:IPR001969"
/db_xref="InterPro:IPR001995"
/db_xref="InterPro:IPR008916"
/db_xref="InterPro:IPR009007"
/db_xref="InterPro:IPR010659"
/db_xref="InterPro:IPR010661"
/db_xref="UniProtKB/TrEMBL:Q8Q895"
/translation="FRENLAFQQGEARKFSSEQTRANSPTSRELGDGGRDNLLSEAGT
EGQGTISSFNFPQITLWQRPLVTVKVGGQLIEALLDTGADDTVLEEINLPGKWKPKMI
GGIGGFIKVRQYDQIPIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIE
TVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVFAIK
KKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDK
NFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPEMVI
YQYMDDLYVGSDLEIGQHRAKIEELRKHLLTWGFTTPDKKHQKEPPFLWMGYELHPDK
WTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDIVTLT
EEAELELAENREILKEPVHGVYYDPTKDLVAEIQKQGQDQWTYQIYQEPFKNLKTGKY
AKRRSAHTNDVKQLTEVVQKAAMESIVIWGKTPKFRLPIQKETWEAWWMEYWQATWIP
EWEFVNTPPLVKLWYQLEKDPIAGAETC"
BASE COUNT 719 a 313 c 400 g 405 t
ORIGIN
1 tgtggaaagg aaggacacca aatgaaagat tgtaccgaga ggcaggctaa ttttttaggg
61 aaaatttggc cttccaacaa ggggaggcca ggaaattttc ctcagagcag accagagcca
121 acagccccac cagcagagag cttggggatg ggggaagaga taacctcctc tccgaagcag
181 gaaccgaggg acaaggaact atatcctcct ttaacttccc tcaaatcact ctttggcaac
241 gacccttagt cacagtaaaa gtagggggac agctaataga agccctatta gacacaggag
301 cagatgatac agtattagaa gaaataaatt taccaggaaa atggaaacca aaaatgatag
361 ggggaattgg aggttttatc aaagtaagac aatatgatca gatacctata gaaatttgtg
421 gaaaaaaggc tataggtaca gtattggtag gacctacacc tgtcaacata attggacgga
481 atatgttgac tcagattggt tgtactttaa attttccaat tagtcctatt gaaactgtgc
541 cagtaaaatt aaagccagga atggatggcc caaaggttaa acaatggcca ttgacagaag
601 aaaaaataaa agcattaaca gaaatttgta cagagatgga aaaagaagga aaaatttcaa
661 aaattgggcc tgaaaatcca tacaatactc cagtatttgc tataaagaaa aaagatagta
721 ctaaatggag aaaattagta gatttcagag aactcaataa aagaactcaa gacttttggg
781 aggtgcaatt aggaatacct catcccgcgg gattaaaaaa gaaaaaatca gtaacagtcc
841 tggatgtggg ggatgcatat ttttcagttc ccttagacaa aaactttaga aagtatactg
901 cattcactat acctagtgta aataatgaga caccagggat tagatatcag tacaatgtgc
961 ttccacaggg atggaaagga tcaccagcaa tatttcaggc aagcatgaca aaaatcttag
1021 agccctttag aacaaaaaat ccagagatgg taatctacca atatatggat gatttatatg
1081 taggatctga cttagagata gggcaacata gagcaaaaat agaggagttg agaaaacatc
1141 tactgacatg gggatttacc acaccagaca aaaaacatca gaaagaacct ccatttcttt
1201 ggatgggata tgaactccat cctgacaaat ggacagtcca gcctataaag ctgccagaaa
1261 aagacagctg gactgttaat gacatacaga aattagtggg aaagctaaat tgggcgagtc
1321 agatttatgc aggaattaaa gtaaagcaac tgtgtaaact cctcagggga gccaaagcac
1381 taacagatat agtaacactg actgaggaag cagaattaga attagcagaa aacagggaaa
1441 ttctaaaaga acctgtacat ggagtatatt atgacccaac aaaagactta gtagcagaaa
1501 tacagaagca agggcaagac caatggacat atcaaattta tcaagagcca tttaaaaatc
1561 taaaaacagg aaaatatgca aaaaggaggt ctgcccacac taatgatgta aaacaattaa
1621 cagaggtagt gcaaaaagcg gctatggaaa gcatagtaat atggggaaag acccctaaat
1681 ttagactacc catacaaaaa gaaacatggg aagcatggtg gatggaatat tggcaagcta
1741 cctggattcc tgaatgggag tttgtcaata cccctcctct agtaaaatta tggtaccaat
1801 tagagaaaga ccccatagca ggagcagaaa cttgctt
//
last modified: Tue May 31 10:56 2022