HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AJ286372		     667 bp    DNA     linear	VRL 15-APR-2005
DEFINITION  Human immunodeficiency virus type 1 proviral partial gag gene for
	    p24, subtype D, isolate 95CM.MP259
ACCESSION   AJ286372
VERSION     AJ286372.1 GI:7532436
KEYWORDS    gag gene; p24.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 667)
            Show all sequences for reference 1
  AUTHORS   Montavon,C., Toure-Kane,C., Liegeois,F., Mpoudi,E., Bourgeois,A.,
	    Vergne,L., Perret,J.L., Boumah,A., Saman,E., Mboup,S., Delaporte,E.
	    and Peeters,M.
  TITLE     Most env and gag subtype A HIV-1 viruses circulating in West and
	    West Central Africa are similar to the prototype AG recombinant
	    virus IBNG
  JOURNAL   J. Acquir. Immune Defic. Syndr. 23 (5), 363-374 (2000)
  PUBMED    10866228
REFERENCE   2 (bases 1 to 667)
            Show all sequences for reference 2
  AUTHORS   Montavon,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2000) Montavon C., Laboratoire Retrovirus, Ird,
	    911, avenue Agropolis, 34032 Montpellier Cedex, FRANCE
FEATURES             Location/Qualifiers
     source	     1..667
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="95CM.MP259"
		     /db_xref="taxon:11676"
		     /country="Cameroon"
		     /note="subtype D"
     gene	     <1..>667
		     /gene="gag"
     CDS	     <1..>667
		     /gene="gag"
		     /codon_start="2"
		     /transl_table="1"
		     /product="p24"
		     /protein_id="CAB86994.1"
		     /db_xref="GI:7532437"
		     /db_xref="GOA:Q9IUY1"
		     /db_xref="HSSP:P04585"
		     /db_xref="InterPro:IPR000721"
		     /db_xref="InterPro:IPR008916"
		     /db_xref="InterPro:IPR008919"
		     /db_xref="UniProtKB/TrEMBL:Q9IUY1"
		     /translation="LQGQMVHQAISPRTLNAWVKVIEEKAFNPEVIPMFSALSEGATP
		     QDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRIHPVHAGPVAPGQMREPRGSDIAGT
		     TSTLQEQIGWMTSNPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYV
		     DRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGG
		     PAIK"
BASE COUNT	247 a	 126 c	  157 g    137 t
ORIGIN
       1 attacagggg caaatggtac accaagccat atcacctaga accttgaacg catgggtaaa 
      61 agtaatagag gaaaaggctt tcaacccgga agtaataccc atgttttcag cattatcaga 
     121 aggagccact ccacaagatt taaacaccat gttaaacacg gtggggggac atcaagcagc 
     181 tatgcaaatg ttaaaagaga ccatcaatga ggaagctgca gaatgggaca ggatacatcc 
     241 agtgcatgca gggcctgttg caccaggtca gatgagagaa ccaaggggaa gtgacattgc 
     301 aggaactact agtacccttc aggaacaaat aggatggatg acaagcaatc cacctatccc 
     361 agtaggagaa atctataaaa gatggataat cttgggatta aataaaatag taagaatgta 
     421 tagccctgtc agcattttgg atataagaca aggaccaaaa gaacccttta gagactatgt 
     481 agaccggttc tataaaactc taagagccga gcaagcttct caagatgtaa aaaattggat 
     541 gacagaaacc ttgttggttc aaaatgcaaa cccagattgt aaaactatct taaaggcatt 
     601 gggaccaggg gctacattag aagaaatgat gacagcatgt cagggagtgg gaggcccagc 
     661 cataaaa
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.