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LOCUS	    AF544476		     297 bp    DNA     linear	VRL 27-MAR-2003
DEFINITION  HIV-1 isolate 1439-062399 from USA protease (pol) gene, partial cds
ACCESSION   AF544476
VERSION     AF544476.1 GI:23507398
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Wu,T.D., Schiffer,C.A., Gonzales,M.J., Taylor,J., Kantor,R.,
	    Chou,S., Israelski,D., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
  TITLE     Mutation patterns and structural correlates in human
	    immunodeficiency virus type 1 protease following different protease
	    inhibitor treatments.
  JOURNAL   J. Virol. 77 (8), 4836-47 (2003)
  PUBMED    12663790
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Wu,T.D., Schiffer,C.A., Taylor,J., Gonzales,M.J., Kantor,R.,
	    Chou,S., Israelski,D., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-SEP-2002) Medicine/Div of Infectious Diseases,
	    Stanford University, 300 Pasteur Drive, Grant Bldg, Room S-156,
	    Stanford, CA 94305, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="1439-062399"
		     /db_xref="taxon:11676"
		     /country="USA"
     gene	     <1..>297
		     /gene="pol"
     CDS	     <1..>297
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAN38140.1"
		     /db_xref="GI:23507399"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMXLPGRWKP
		     KMIGGIGGFIKVRQYDQVLIEICGHKITGTVLIGPTPVNIIGRSLLTQLGCTLNF"
BASE COUNT	104 a	  47 c	   68 g     76 t      2 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcaactaaag 
      61 gaagctctrt tagatacagg agcagatgat acagtattag aagaaatgar tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta ttaaagtaag acagtatgat 
     181 caggtactca tagaaatctg tgggcataaa attacaggta cagtattaat aggacctaca 
     241 cctgtcaaca taattggaag aagtctgttg actcagcttg gctgtacttt aaatttt
//
last modified: Tue May 31 10:56 2022


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