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LOCUS	    AF514082		     870 bp    DNA     linear	VRL 18-APR-2005
DEFINITION  HIV-1 isolate 1492-110299 from USA reverse transcriptase (pol)
	    gene, partial cds
ACCESSION   AF514082
VERSION     AF514082.1 GI:21435288
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 870)
            Show all sequences for reference 1
  AUTHORS   Gonzales,M.J., Wu,T.D., Taylor,J., Belitskaya,I., Kantor,R.,
	    Israelski,D., Chou,S., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
  TITLE     Extended spectrum of HIV-1 reverse transcriptase mutations in
	    patients receiving multiple nucleoside analog inhibitors
  JOURNAL   AIDS 17 (6), 791-799 (2003)
  PUBMED    12660525
REFERENCE   2 (bases 1 to 870)
            Show all sequences for reference 2
  AUTHORS   Gonzales,M.J., Wu,T.D., Taylor,J., Belitskaya,I., Kantor,R.,
	    Israelski,D., Chou,S., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAY-2002) Dept of Medicine/Div of Infectious
	    Diseases, Stanford University, 300 Pasteur Drive, Grant Bldg, Room
	    S-156, Stanford, CA 94305, USA
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Kantor,R., Shafer,R.W., Follansbee,S., Taylor,J., Shilane,D.,
	    Hurley,L., Nguyen,D.P., Nguyen,D.-P., Katzenstein,D. and
	    Fessel,W.J.
  TITLE     Evolution of resistance to drugs in HIV-1-infected patients failing
	    antiretroviral therapy
  JOURNAL   AIDS 18 (11), 1503-1511 (2004)
  PUBMED    15238768
REFERENCE   4
            Show all sequences for reference 4
  AUTHORS   Rhee,S.-Y., Fessel,W.J., Liu,T.F., Marlowe,N.M., Rowland,C.M.,
	    Rode,R.A., Vandamme,A.-M., Van Laethem,K., Brun-Vezinet,F.,
	    Calvez,V., Taylor,J., Hurley,L., Horberg,M. and Shafer,R.W.
  TITLE     Predictive value of HIV-1 genotypic resistance test interpretation
	    algorithms.
  JOURNAL   J. Infect. Dis.. 200(3); 453-63 (2009)
  PUBMED    19552527
FEATURES             Location/Qualifiers
     source	     1..870
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="1492-110299"
		     /db_xref="taxon:11676"
		     /country="USA"
     gene	     <1..>870
		     /gene="pol"
     CDS	     <1..>870
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="AAM53741.1"
		     /db_xref="GI:21435289"
		     /translation="PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICTELEKE
		     GKISXIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKK
		     XKSVTVLDVGDAYFSVPLDEDFRXYTAFTIPSXNSXTPGIRYQYNVLPQGWKGSPAIF
		     QSSMTKILEPFRKQNPGIVIYQYMDDLYVGSDLEIGQHRTKIEELREHLLKWGFYTPD
		     KKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKV
		     KXLCKLLRGXKALT"
BASE COUNT	336 a	 145 c	  181 g    201 t      7 other
ORIGIN
       1 cccattagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaga 
      61 gttaaacaat ggccattgac agaagaaaaa ataaaagcat tagtagaaat ttgtacagaa 
     121 ttggaaaagg aaggaaaaat ttcaaraatt gggcctgaaa atccatacaa tactccagta 
     181 tttgccataa agaaaaaaga cagtactaag tggagaaaat tagtagattt cagagaactt 
     241 aataagagaa ctcaagactt ctgggaagtt caattaggaa taccacatcc cgcagggtta 
     301 aaaaagaama aatcagtgac agtactggat gtgggtgatg catatttttc agttccctta 
     361 gatgaagact tcaggargta tactgcattt accataccta gtwtaaacag tkagacacca 
     421 gggattagat atcagtacaa tgtgcttcca cagggatgga aaggatcacc agcaatattc 
     481 caaagtagca tgacaaaaat cttagagcct tttagaaaac aaaatccagg catagttatc 
     541 tatcaataca tggatgatct gtatgtagga tctgacttag aaatagggca acatagaaca 
     601 aaaatagaag aactgagaga acatctgttg aagtggggat tttacacacc agacaagaag 
     661 catcagaaag aacctccatt cctttggatg ggttatgaac tccatcctga taaatggaca 
     721 gtacagccta tagtgctgcc agaaaaggac agctggactg tcaatgacat acagaagtta 
     781 gtgggaaaac tgaattgggc aagccagatt tatccaggga ttaaagtaaa gcasttatgt 
     841 aaactcctta ggggarccaa agcactaaca 
//
last modified: Tue May 31 10:56 2022


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