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LOCUS AF514082 870 bp DNA linear VRL 18-APR-2005
DEFINITION HIV-1 isolate 1492-110299 from USA reverse transcriptase (pol)
gene, partial cds
ACCESSION AF514082
VERSION AF514082.1 GI:21435288
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 870)
Show all sequences for reference 1
AUTHORS Gonzales,M.J., Wu,T.D., Taylor,J., Belitskaya,I., Kantor,R.,
Israelski,D., Chou,S., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
TITLE Extended spectrum of HIV-1 reverse transcriptase mutations in
patients receiving multiple nucleoside analog inhibitors
JOURNAL AIDS 17 (6), 791-799 (2003)
PUBMED 12660525
REFERENCE 2 (bases 1 to 870)
Show all sequences for reference 2
AUTHORS Gonzales,M.J., Wu,T.D., Taylor,J., Belitskaya,I., Kantor,R.,
Israelski,D., Chou,S., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2002) Dept of Medicine/Div of Infectious
Diseases, Stanford University, 300 Pasteur Drive, Grant Bldg, Room
S-156, Stanford, CA 94305, USA
REFERENCE 3
Show all sequences for reference 3
AUTHORS Kantor,R., Shafer,R.W., Follansbee,S., Taylor,J., Shilane,D.,
Hurley,L., Nguyen,D.P., Nguyen,D.-P., Katzenstein,D. and
Fessel,W.J.
TITLE Evolution of resistance to drugs in HIV-1-infected patients failing
antiretroviral therapy
JOURNAL AIDS 18 (11), 1503-1511 (2004)
PUBMED 15238768
REFERENCE 4
Show all sequences for reference 4
AUTHORS Rhee,S.-Y., Fessel,W.J., Liu,T.F., Marlowe,N.M., Rowland,C.M.,
Rode,R.A., Vandamme,A.-M., Van Laethem,K., Brun-Vezinet,F.,
Calvez,V., Taylor,J., Hurley,L., Horberg,M. and Shafer,R.W.
TITLE Predictive value of HIV-1 genotypic resistance test interpretation
algorithms.
JOURNAL J. Infect. Dis.. 200(3); 453-63 (2009)
PUBMED 19552527
FEATURES Location/Qualifiers
source 1..870
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="1492-110299"
/db_xref="taxon:11676"
/country="USA"
gene <1..>870
/gene="pol"
CDS <1..>870
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="AAM53741.1"
/db_xref="GI:21435289"
/translation="PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICTELEKE
GKISXIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKK
XKSVTVLDVGDAYFSVPLDEDFRXYTAFTIPSXNSXTPGIRYQYNVLPQGWKGSPAIF
QSSMTKILEPFRKQNPGIVIYQYMDDLYVGSDLEIGQHRTKIEELREHLLKWGFYTPD
KKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKV
KXLCKLLRGXKALT"
BASE COUNT 336 a 145 c 181 g 201 t 7 other
ORIGIN
1 cccattagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaga
61 gttaaacaat ggccattgac agaagaaaaa ataaaagcat tagtagaaat ttgtacagaa
121 ttggaaaagg aaggaaaaat ttcaaraatt gggcctgaaa atccatacaa tactccagta
181 tttgccataa agaaaaaaga cagtactaag tggagaaaat tagtagattt cagagaactt
241 aataagagaa ctcaagactt ctgggaagtt caattaggaa taccacatcc cgcagggtta
301 aaaaagaama aatcagtgac agtactggat gtgggtgatg catatttttc agttccctta
361 gatgaagact tcaggargta tactgcattt accataccta gtwtaaacag tkagacacca
421 gggattagat atcagtacaa tgtgcttcca cagggatgga aaggatcacc agcaatattc
481 caaagtagca tgacaaaaat cttagagcct tttagaaaac aaaatccagg catagttatc
541 tatcaataca tggatgatct gtatgtagga tctgacttag aaatagggca acatagaaca
601 aaaatagaag aactgagaga acatctgttg aagtggggat tttacacacc agacaagaag
661 catcagaaag aacctccatt cctttggatg ggttatgaac tccatcctga taaatggaca
721 gtacagccta tagtgctgcc agaaaaggac agctggactg tcaatgacat acagaagtta
781 gtgggaaaac tgaattgggc aagccagatt tatccaggga ttaaagtaaa gcasttatgt
841 aaactcctta ggggarccaa agcactaaca
//
last modified: Tue May 31 10:56 2022