View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS AF514040 792 bp DNA linear VRL 18-APR-2005
DEFINITION HIV-1 isolate 1270-081798 from USA reverse transcriptase (pol)
gene, partial cds
ACCESSION AF514040
VERSION AF514040.1 GI:21435204
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 792)
Show all sequences for reference 1
AUTHORS Gonzales,M.J., Wu,T.D., Taylor,J., Belitskaya,I., Kantor,R.,
Israelski,D., Chou,S., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
TITLE Extended spectrum of HIV-1 reverse transcriptase mutations in
patients receiving multiple nucleoside analog inhibitors
JOURNAL AIDS 17 (6), 791-799 (2003)
PUBMED 12660525
REFERENCE 2 (bases 1 to 792)
Show all sequences for reference 2
AUTHORS Gonzales,M.J., Wu,T.D., Taylor,J., Belitskaya,I., Kantor,R.,
Israelski,D., Chou,S., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2002) Dept of Medicine/Div of Infectious
Diseases, Stanford University, 300 Pasteur Drive, Grant Bldg, Room
S-156, Stanford, CA 94305, USA
FEATURES Location/Qualifiers
source 1..792
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="1270-081798"
/db_xref="taxon:11676"
/country="USA"
gene <1..>792
/gene="pol"
CDS <1..>792
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="AAM53699.1"
/db_xref="GI:21435205"
/translation="PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELEKD
GKISKIGPENPYNTPVFAIKKKNSTKWRKLVDFRELNKRTQDFSEVQLGIPHPAGLEK
KKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTIILEPFRKQNPDIVIYQYIDDLYVASDLEIGQHRTKIEELRQHLWKWGFYTPD
KKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKL"
BASE COUNT 315 a 133 c 157 g 186 t 1 other
ORIGIN
1 cccattagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaaa
61 gttaaacaat ggccattgac agaagaaaaa ataaaagcat tagtagaaat ttgtacagaa
121 ttggaaaagg atggaaaaat ttcaaaaatt gggcctgaaa acccatacaa tactccagta
181 tttgccataa agaaaaagaa cagtactaaa tggagaaaat tagtagattt cagagaactt
241 aataagagaa ctcaagactt ctcggaagtt caattaggra taccacatcc tgcagggtta
301 gaaaagaaaa aatcagtaac agtactagat gtgggtgatg catatttctc agttccctta
361 gataaagact tcaggaagta tactgcattt accataccta gtataaacaa tgagacacca
421 gggattagat atcagtacaa tgtgcttcca cagggatgga aaggatcacc agcaatattc
481 caaagtagca tgacaataat cttagagcct tttaggaaac aaaatccaga catagttatc
541 tatcaataca tagatgattt gtatgtagca tctgacttag aaatagggca gcacagaaca
601 aaaatagagg aactgagaca acatctgtgg aagtggggat tttacacacc agacaaaaaa
661 catcagaagg aacccccatt cctttggatg ggttatgaac tccatcctga taaatggaca
721 gtacagccta tagtattgcc agaaaaagat agctggactg tcaatgacat acagaagtta
781 gtgggaaaat tg
//
last modified: Tue May 31 10:56 2022