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LOCUS AF487136 1047 bp DNA linear VRL 05-MAY-2004
DEFINITION HIV-1 isolate UFC-E8/91 from France pol protein (pol) gene, partial
cds
ACCESSION AF487136
VERSION AF487136.1 GI:19852036
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1047)
Show all sequences for reference 1
AUTHORS Palmer,S., Vuitton,D., Gonzales,M.J., Bassignot,A. and Shafer,R.W.
TITLE Reverse transcriptase and protease sequence evolution in two
HIV-1-infected couples
JOURNAL J. Acquir. Immune Defic. Syndr. 31 (3), 285-290 (2002)
PUBMED 12439203
REFERENCE 2 (bases 1 to 1047)
Show all sequences for reference 2
AUTHORS Palmer,S., Vuitton,D., Gonzales,M.J., Hellman,V., Bassignot,A.,
Pallansch,L. and Shafer,R.W.
TITLE Direct Submission
JOURNAL Submitted (22-FEB-2002) Division of Infectious Disease, Stanford
University, 300 Pasteur Drive, Grant Bldg, Room S-156, Stanford, CA
95305, USA
FEATURES Location/Qualifiers
source 1..1047
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="UFC-E8/91"
/db_xref="taxon:11676"
/country="France"
gene <1..>1047
/gene="pol"
CDS <1..>1047
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAL99973.1"
/db_xref="GI:19852037"
/translation="PQITLWQRPLVTIKIGGQLREALLDTGADDTVLEDLNLPGKWKP
KMIGGIGGFIKVRQYDQXPIEICGHKTIGTVLVGPTPVNIIGRNLLTQLGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIXKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKKKNSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFHWMGYELH
PDKWTVQPIVLPDKD"
BASE COUNT 406 a 178 c 211 g 245 t 7 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcagctaagg
61 gaagctctat tagatacagg agcagatgat acagtattag aagacctaaa tttaccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagrtaccca tagaaatytg tggacataaa actataggta cagtactagt aggacctaca
241 cctgtcaaca taattggmag aaayctgttg actcagcttg gttgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg gccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcaytag tagaaatttg tacagaaatg
421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaasa aaaaagacag tactaaatgg agaaaattag tagacttcag agaacttaat
541 aagagaactc aagacttttg ggaagttcaa ttaggaatac cacatccctc agggttaaaa
601 aagaaaaatt cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaagacttca ggaagtatac tgcatttacc atacctagta taaacaatga aacaccaggg
721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca cagaacaaaa
901 atagaggaac tgagacaaca tctgttgaag tggggattta ccacaccaga taagaaacat
961 cagaaagaac ctccattcca ttggatgggc tatgaactcc atcctgataa atggacagtr
1021 cagcctatag tgctgccaga caaagac
//
last modified: Tue May 31 10:56 2022