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LOCUS AF487122 1047 bp DNA linear VRL 05-MAY-2004
DEFINITION HIV-1 isolate UFC-A1/92 from France pol protein (pol) gene, partial
cds
ACCESSION AF487122
VERSION AF487122.1 GI:19852008
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1047)
Show all sequences for reference 1
AUTHORS Palmer,S., Vuitton,D., Gonzales,M.J., Bassignot,A. and Shafer,R.W.
TITLE Reverse transcriptase and protease sequence evolution in two
HIV-1-infected couples
JOURNAL J. Acquir. Immune Defic. Syndr. 31 (3), 285-290 (2002)
PUBMED 12439203
REFERENCE 2 (bases 1 to 1047)
Show all sequences for reference 2
AUTHORS Palmer,S., Vuitton,D., Gonzales,M.J., Hellman,V., Bassignot,A.,
Pallansch,L. and Shafer,R.W.
TITLE Direct Submission
JOURNAL Submitted (22-FEB-2002) Division of Infectious Disease, Stanford
University, 300 Pasteur Drive, Grant Bldg, Room S-156, Stanford, CA
95305, USA
FEATURES Location/Qualifiers
source 1..1047
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="UFC-A1/92"
/db_xref="taxon:11676"
/country="France"
gene <1..>1047
/gene="pol"
CDS <1..>1047
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAL99959.1"
/db_xref="GI:19852009"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDMNLPGRWKP
KMIGGIGGFIKVXQYDQIPXEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISXIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIVLPEKD"
BASE COUNT 406 a 175 c 212 g 249 t 5 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgac acagtattag aagacatgaa tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggrggtttta tcaaagtaar acagtatgat
181 cagatacccr tagaaatctg tggacataaa gctataggta cagtrttagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcaaattg gttgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg
421 gaaaaggaag ggaaaatttc aaraattggg cctgaaaatc catataatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagaaaactc aagacttctg ggaagttcaa ttaggaatcc cacatcccgc agggttaaaa
601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaagacttca ggaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa
901 atagaggaat tgagacaaca tctgttgagg tggggattta ccacaccaga caaaaaacat
961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctatag tgctgccaga aaaagac
//
last modified: Tue May 31 10:56 2022