HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AF484501		    8849 bp    DNA     linear	VRL 16-MAR-2005
DEFINITION  HIV-1 isolate 99UGK30889 from Uganda, partial genome
ACCESSION   AF484501
VERSION     AF484501.1 GI:25166860
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 8849)
            Show all sequences for reference 1
  AUTHORS   Harris,M.E., Serwadda,D., Sewankambo,N., Kim,B., Kigozi,G.,
	    Kiwanuka,N., Phillips,J.B., Wabwire,F., Meehen,M., Lutalo,T.,
	    Lane,J.R., Merling,R., Gray,R., Wawer,M., Birx,D.L., Robb,M.L. and
	    McCutchan,F.E.
  TITLE     Among 46 near full length HIV type 1 genome sequences from Rakai
	    District, Uganda, subtype D and AD recombinants predominate
  JOURNAL   AIDS Res. Hum. Retroviruses 18 (17), 1281-1290 (2002)
  PUBMED    12487816
REFERENCE   2 (bases 1 to 8849)
            Show all sequences for reference 2
  AUTHORS   Gray,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2002) Johns Hopkins University, Baltimore, MD,
	    USA
REFERENCE   3 (bases 1 to 8849)
            Show all sequences for reference 3
  AUTHORS   Harris,M.E., Birx,D.L. and Robb,M.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2002) Walter Reed Army Institute of Research,
	    Washington, DC, USA
REFERENCE   4 (bases 1 to 8849)
            Show all sequences for reference 4
  AUTHORS   Kim,B., Phillips,J.B., Lane,J.R., Merling,R. and McCutchan,F.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2002) The Henry M. Jackson Foundation, Rockville,
	    MD, USA
REFERENCE   5 (bases 1 to 8849)
            Show all sequences for reference 5
  AUTHORS   Lutalo,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2002) Uganda Virus Research Institute, Entebbe,
	    Uganda
REFERENCE   6 (bases 1 to 8849)
            Show all sequences for reference 6
  AUTHORS   Meehen,M. and Wawer,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2002) Columbia University, New York, NY, USA
REFERENCE   7 (bases 1 to 8849)
            Show all sequences for reference 7
  AUTHORS   Serwadda,S., Sewankambo,N., Wabwire,F., Kigozi,G. and Kiwanuka,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2002) Makerere University, Kampala, Uganda
COMMENT     One of a set of complete genomes from 46 patients from Uganda.
	    These sequences are from volunteers from Rakai district, 37 of whom
	    are enrolled in cohort studies; they were referred by an AIDS
	    surveillance program or an STD clinic. Another nine sequences were
	    obtained from anonymous discard samples. Of the set, more than half
	    were subtype D; 15% were subtype A; and a quarter were AD
	    recombinants with unique mosaic patterns. A few AC and CD
	    recombinants were also found.
FEATURES             Location/Qualifiers
     source	     1..8849
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="99UGK30889"
		     /isolation_source="sequenced from a short term co-culture
		     on normal human PBMC"
		     /db_xref="taxon:11676"
		     /country="Uganda: Rakai"
		     /note="subtype: AC"
     gene	     <1..4280
		     /gene="gag-pol"
     CDS	     join(<1..1278,1278..4280)
		     /gene="gag-pol"
		     /ribosomal_slippage="gag-pol"
		     /note="translated by -1 ribosomal slip on tttttt slippery
		     sequence followed by inverted repeat stem-loop structure
		     which potentiates slippage"
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag-pol fusion polyprotein"
		     /protein_id="AAN73646.1"
		     /db_xref="GI:25166861"
		     /translation="ARASILTGGKLDAWEKIRLRPGGKKKYRLKHLVWASRELDRFAL
		     NPSLLETPEGCQQIMEQLQPALRTGTEEIRSLFNLVTTLYCVHQRIDVKDTKEAVDKI
		     EEIQKKSKTQQAAADTGSSNKVSQNYPIVQNAQGQMIHQSLSPRTLNAWVKVIEERGF
		     SPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPVQAGP
		     IPPGQLREPRGSDIAGTTSTPQEQIGWMTNNPPIPVGDIYKRWIILGLNKIVRMYSPV
		     SILDIKQGPKEPFKDYVDRFFKTLRAEQATQDVKGWMTETLLVQNANPDCKSILRALG
		     PGATLEEKMTACQGVGGPGHKARVLAEAMSQVQQTNIMMQRGNFKGQKRIKCFNCGKE
		     GHLARNCRAPRKQGCWKCGKEGHQMKDCTERQANFFRENLAFQQGEAREFSSKQTGAN
		     SPASRDLWDGGRDNLSPEAGAGTGPTLSFPQITLWQRPLVTVKIGGQLKEALLDTGAD
		     DTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGR
		     NMLTQIGCTLNFPISPIETVPVTLKPGMDGPRIKQWPLTEEKIKALTEICKEMEKEGK
		     ISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKK
		     SVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQS
		     SMTKILEPFRSKNPEIIIYQYMDDLYVGFDLEIGQHRTKVEELRAHLLKWGFTTPDKK
		     HQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYAGIKVTQ
		     LCKLLRGAKALTDIVPLTEEAELELAENREILKDPVHGVYYDPSKDLIAEIQKQGQDQ
		     WTYQIYQEPFKNLKTGKYARKRSAHTNDVKQLAEVVQKVVMESIVIWGKMPKFKLPIQ
		     KETWETWWMDYWQATWIPEWEFVNTPPLVKLWYQLEKDPIVGAETFYVDGAANRETKL
		     GKAGYVTDRGRQKVVSLTETTNQKTELHAIYLALQDSGSEVNIVTDSQYALGIIQAQP
		     DRSESELVTLIIEKLIGKDKVYLSWVPAHKGIGGNEQVDKLVSSGIRKILFLDGIDKA
		     QEDHERYHSNWRTMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGMWQLDCT
		     HLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVVHTDNGSNFTSA
		     AFKAACWWANVQQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAVFI
		     HNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQIIKIQNFRVYYRDSRDPIWKGPAK
		     LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED"
     gene	     <1..1476
		     /gene="gag"
     CDS	     <1..1476
		     /gene="gag"
		     /note="sequencing started at 3rd amino acid of gag"
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag polyprotein precursor"
		     /protein_id="AAN73647.1"
		     /db_xref="GI:25166862"
		     /translation="ARASILTGGKLDAWEKIRLRPGGKKKYRLKHLVWASRELDRFAL
		     NPSLLETPEGCQQIMEQLQPALRTGTEEIRSLFNLVTTLYCVHQRIDVKDTKEAVDKI
		     EEIQKKSKTQQAAADTGSSNKVSQNYPIVQNAQGQMIHQSLSPRTLNAWVKVIEERGF
		     SPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPVQAGP
		     IPPGQLREPRGSDIAGTTSTPQEQIGWMTNNPPIPVGDIYKRWIILGLNKIVRMYSPV
		     SILDIKQGPKEPFKDYVDRFFKTLRAEQATQDVKGWMTETLLVQNANPDCKSILRALG
		     PGATLEEKMTACQGVGGPGHKARVLAEAMSQVQQTNIMMQRGNFKGQKRIKCFNCGKE
		     GHLARNCRAPRKQGCWKCGKEGHQMKDCTERQANFLGKIWPSSKGRPGNFPQSRPEPT
		     APPAEIFGMGEEITSPPKQEREQAPPLVSLKSLFGNDPLSQ"
     gene	     4225..4803
		     /gene="vif"
     CDS	     4225..4803
		     /gene="vif"
		     /codon_start="1"
		     /transl_table="1"
		     /product="vif protein"
		     /protein_id="AAN73648.1"
		     /db_xref="GI:25166863"
		     /translation="MENRWQVMIVWQVDRMKIRTWHSLVKYHMYISKKAKDWRYRHHY
		     ESRHPKVSSEVHIPLGDARLVVRTYWGLQTGEREWHLGHGVSIEWRIKRYSTQIDPDL
		     ADQLIHLHHFNCFSDSAIRKAILGQVVSPSCEYQAGHNKVGSLQYLALKALVTPTKIK
		     PPLPSVRKLTEDRWNKPQKTRGPRGNHTMNGH"
     gene	     4743..5033
		     /gene="vpr"
     CDS	     4743..5033
		     /gene="vpr"
		     /codon_start="1"
		     /transl_table="1"
		     /product="vpr protein"
		     /protein_id="AAN73654.1"
		     /db_xref="GI:25166869"
		     /translation="MEQAPEDQGPQREPYNEWTLELLEELKHEAVRHFPRPWLHGLGQ
		     HIYNTYGDTWEGVEAIIRTLQQLLFVHFRIGCQHSRIGIIRRRRGRDGSDRS"
     gene	     5014..7680
		     /gene="tat"
     CDS	     join(5014..5228,7590..7680)
		     /gene="tat"
		     /note="protein extends 15 amino acids beyond HXB2 Tat"
		     /codon_start="1"
		     /transl_table="1"
		     /product="tat protein"
		     /protein_id="AAN73649.1"
		     /db_xref="GI:25166864"
		     /translation="MDPIDPNLEPWNHPGSQPATACSPCYCKKCCYHCLRCFQTKGLG
		     ISYGRKKRRQRRSAPPSSEDHQNLISKQPMPQTQGVSTGPEESKKKVESKTETDRFD"
     gene	     5153..7885
		     /gene="rev"
     CDS	     join(5153..5228,7590..7885)
		     /gene="rev"
		     /codon_start="1"
		     /transl_table="1"
		     /product="rev protein"
		     /protein_id="AAN73650.1"
		     /db_xref="GI:25166865"
		     /translation="MAGRSGDSDEALLQAVKIIKILYQSNPCPKPRGSRQARKNRRRR
		     WRARQRQIDSISERILSTCLGRPTEPVPLQLPPIERLQLDCSESCGTSGTQQSQGTET
		     GVGRPQVSVESSSILGTGTKN"
     gene	     5252..5503
		     /gene="vpu"
     CDS	     5252..5503
		     /gene="vpu"
		     /codon_start="1"
		     /transl_table="1"
		     /product="vpu protein"
		     /protein_id="AAN73651.1"
		     /db_xref="GI:25166866"
		     /translation="MLEAIDYRLGIGALIVALIIAIVVWTIAYIEYRKLVRQRKIDWL
		     IKRIKERAEDSGNESDGDTEELSTMVDMGHLRLLDGNDL"
     gene	     5421..8027
		     /gene="env"
     CDS	     5421..8027
		     /gene="env"
		     /note="gp160; cleaved into signal, gp120, and gp41"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAN73652.1"
		     /db_xref="GI:25166867"
		     /translation="MRVMGIQRNCQQWWIWGILGFWMVMIYNVLGNTWVTVYYGVPVW
		     RDAETTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEINLENVTEQFNMWKNNMVEQ
		     MHTDIISLWDQSLKPCVQLTPLCVTLECTNYAPNTTNVTKSTSVPEEMVGEIKNCSFN
		     MTTELRDKKQKVYSLFYKLDVVPLDSSNNSSNSNISQYRLINCNTSTITQACPKVTFE
		     PIPIHYCAPAGFAILKCRDKKFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEE
		     VMIRSENITDNAKNIIVQFKNSVNITCIRPNNNTRKGVHIGPGQAFYATGEIIGNIRQ
		     AHCNVTRAKWNDTLQKVAEQLRKHFRNKTIIFNTTTGGDPEITTHSFNCNGEFFYCNT
		     SGLFNHTYTWYNGSLQESNSTGSDNITLQCRIKQIINMWQRVGQAMYAPPIRGVIQCE
		     SNITGLILTRDGGNNNDNTTEIFRPGGGDMRDNWRSELYKYKVVTIEPLGVAPTQARR
		     RVVEREKRAVGIGAVLLGFLGTAGSTMGAASMTLTVQARQLLSGIVQQQSNLLKAIEA
		     QQQLLRLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTNVPWNTSWSNKSL
		     HDIWDNMTWMQWDKEISNYTEIIYKLIEESQNQQEKNEQDLLALDKWADLWNWFNISN
		     WLWYIRIFIMIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQTHAPNPGGLDRPGRIEE
		     EGGEQDRDRSIRLVSGFLALAWDDLRSLCLFSYHRLRDFSLIAARAVELLGHSSLKGL
		     RLGWEGLKYLWNLLAYWGRELKISAINLLDTIAIAVAGWTDRVIEVGQRLGRAILNIP
		     RRIRQGFERALL"
     gene	     8029..8652
		     /gene="nef"
     CDS	     8029..8652
		     /gene="nef"
		     /codon_start="1"
		     /transl_table="1"
		     /product="nef protein"
		     /protein_id="AAN73653.1"
		     /db_xref="GI:25166868"
		     /translation="MGGKWSKRSIVGWPKVRERIVQTDPAAEGVGAASQDLDKHGALT
		     SSNTPGNNATCAWLEAQEEDGEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLDGLI
		     YSQKRQDILDLWVYHTQGYFPDWQNYTPGPGIRFPLTFGWCFKLVPVDPREVEEANKG
		     ENTSLLHPVSLHGMEDDNREVLIWKFDSHLAFKHTARELHPEYYKDC"
     LTR	     8321..>8849
		     /note="complete U3 and partial R-repeat region"
BASE COUNT     3220 a	1569 c	 2106 g   1954 t
ORIGIN
       1 gcgagagcgt caatattaac ggggggaaaa ttagatgcgt gggagaaaat tcggctaagg 
      61 ccagggggaa agaaaaaata tagattaaaa catctagtat gggcaagcag ggagctggac 
     121 agattcgcac ttaaccctag ccttttagaa acaccagaag gatgtcaaca aataatggaa 
     181 caattacaac cagctctcag gacaggaaca gaagaaatta gatcattatt taatctagta 
     241 acaaccctct attgtgtaca tcaaagaata gatgtaaaag acaccaagga agctgtagat 
     301 aaaatagagg aaatacaaaa gaagagcaaa acacaacagg cagcagctga tacaggaagc 
     361 agcaacaagg tcagccaaaa ttaccctata gtgcaaaatg cacaagggca aatgatacac 
     421 cagtccttat caccaaggac cttgaatgca tgggtgaaag taatagaaga aaggggtttc 
     481 agcccagaag taatacccat gttctcagca ttatcagaag gagccacccc acaagattta 
     541 aacatgatgc tgaacatagt ggggggacac caggcagcta tgcaaatgtt aaaagatacc 
     601 atcaatgagg aagctgcaga atgggacagg ttacatccag tacaggcagg gcctattcca 
     661 ccaggccagc tgagggaacc aaggggaagt gacatagcag gaactactag tacccctcaa 
     721 gagcaaatag ggtggatgac aaacaatcca cctatcccag tgggagacat ctataaaaga 
     781 tggataatcc tgggattaaa taaaatagta agaatgtata gccctgttag cattttggac 
     841 ataaaacaag ggccaaaaga acccttcaaa gactatgtag acaggttctt taaaactctc 
     901 agagccgaac aggctacaca ggatgtaaaa ggctggatga cagaaacctt gctggtccaa 
     961 aatgcaaatc cagattgtaa gtccatttta agagcattag gaccaggggc tacattagaa 
    1021 gaaaagatga cagcatgcca gggagtggga ggacccggcc ataaagcaag ggttttagct 
    1081 gaggcaatga gtcaagtaca acagacaaat ataatgatgc agagaggcaa tttcaagggc 
    1141 cagaaaagaa ttaagtgttt caactgtggc aaagaagggc acctagccag aaattgcagg 
    1201 gcccctagaa aacagggctg ttggaaatgt ggaaaagaag gacaccagat gaaagactgt 
    1261 actgagagac aggctaattt tttagggaaa atttggcctt ccagcaaggg gaggccaggg 
    1321 aattttcctc aaagcagacc ggagccaaca gccccgccag cagagatctt tgggatgggg 
    1381 gaagagataa cctctccccc gaagcaggag cgggaacagg ccccaccctt agtttccctc 
    1441 aaatcactct ttggcaacga ccccttgtca cagtaaaaat aggaggacag ctaaaagaag 
    1501 ctctattaga tacaggagca gatgatacag tattagaaga tataaatttg ccaggaaaat 
    1561 ggaaaccaaa aatgataggg ggaattggag gttttatcaa agtaagacag tatgatcaga 
    1621 tacttataga aatttgtgga aaaaaggcta taggtacagt attagtagga cccacacctg 
    1681 tcaacataat tggaagaaat atgttgactc agattggttg tactttgaat tttccaatta 
    1741 gtcctattga gactgtacca gtaacattaa agccaggaat ggatggccct aggattaaac 
    1801 aatggccatt gacagaagaa aaaataaaag cattaacaga aatttgtaaa gaaatggaaa 
    1861 aggaaggaaa aatttcaaaa attgggcctg aaaatccata caatactcca atatttgcta 
    1921 taaagaagaa agatagcaca aaatggagaa aattagtaga ttttagagag ctcaataaaa 
    1981 gaacccaaga cttctgggaa gttcaattag gaataccaca tcccgcaggt ctaaaaaaga 
    2041 aaaaatcagt aacagtacta gatgtaggag acgcatattt ttcagttcct ttagatgaaa 
    2101 gctttagaaa gtatactgca ttcaccatac ctagtataaa caatgagaca ccaggaatca 
    2161 ggtatcaata caatgtgctt ccacagggat ggaaaggatc accagcaata ttccagagta 
    2221 gcatgacaaa aatcttagag ccctttagat caaaaaatcc agaaataatt atatatcaat 
    2281 acatggatga cctgtatgta ggatttgatt tagaaatagg gcaacataga acaaaagtag 
    2341 aggagttgag agctcatcta ttgaagtggg gatttactac accagacaaa aaacatcaga 
    2401 aagaacctcc atttctttgg atgggatatg aactccatcc tgacaaatgg acagtacagc 
    2461 ctatacagct gccagacaag gacagctgga ctgtcaatga tatacaaaaa ttagtgggaa 
    2521 aactaaattg ggcaagtcaa atttatgcag ggattaaagt aacacaactg tgtaaactcc 
    2581 tcagaggagc caaagcacta acagatatag taccactgac tgaggaagca gaattagaat 
    2641 tggcagaaaa cagggagatt ctaaaagatc ctgtgcatgg agtatattat gacccatcaa 
    2701 aagacttaat agcagaaata cagaaacaag ggcaagacca atggacatat caaatttatc 
    2761 aagaaccatt taaaaatcta aagacaggaa aatatgcaag aaaaaggtct gctcacacta 
    2821 atgatgtaaa acaattagca gaagtggtgc aaaaagtggt catggaaagc atagtaatat 
    2881 ggggaaagat gcctaaattt aagctaccca tacaaaaaga aacatgggaa acatggtgga 
    2941 tggactattg gcaggctacc tggattcctg aatgggagtt tgtcaatacc cctcctctag 
    3001 taaaattatg gtaccagtta gagaaagacc ccatagtagg agcagagact ttctatgtag 
    3061 atggggcagc taatagggaa actaagctag gaaaagcagg atatgttact gacagaggaa 
    3121 gacaaaaggt tgtttcccta actgagacaa caaatcaaaa gactgaacta catgcaatct 
    3181 atctagcctt gcaggattca gggtcagaag taaatatagt aacagactca caatatgcat 
    3241 taggaatcat tcaggcacaa ccagacagaa gtgaatcaga gttagtcact ctaataatag 
    3301 agaagctaat aggaaaggac aaagtctacc tgtcatgggt accagcacat aaggggattg 
    3361 gaggaaatga acaagtagat aaattagtca gctctggaat caggaagata ctgtttttag 
    3421 atgggataga taaggctcaa gaagaccatg aaagatatca cagcaattgg agaacaatgg 
    3481 ctagtgattt taatctgcca cctatagtag caaaggaaat agtagccagc tgtgataaat 
    3541 gtcaactaaa aggggaggcc atgcatggac aagtagactg tagtccaggg atgtggcaat 
    3601 tagattgcac acatctagaa ggaaaagtaa ttctggtagc agtccatgta gccagtggct 
    3661 atatagaggc agaagttatt ccagcagaaa caggacagga gacagcatac tttctgctaa 
    3721 aattagcagg aagatggcca gtaaaagtag tacacacaga caatggcagc aatttcacca 
    3781 gtgctgcatt taaagcagcc tgttggtggg caaatgtcca acaggaattt ggaattccct 
    3841 acaatcccca aagtcaagga gtagtggaat ctatgaataa ggaattaaag aaaatcatag 
    3901 ggcaggtacg agagcaagct gaacatctta agacagcagt acaaatggca gtattcattc 
    3961 acaattttaa aagaaaaggg gggattgggg ggtacagtgc aggggaaaga ataatagaca 
    4021 taatagcaac agacatacaa actaaggaac tacaaaaaca aattataaaa attcaaaatt 
    4081 ttcgggttta ttacagggac agcagagatc caatttggaa aggaccagca aaactactct 
    4141 ggaaaggtga aggagcagta gtaatacagg acaatagtga tataaaggta gtgcccagaa 
    4201 gaaaagcaaa gatcattagg gattatggaa aacagatggc aggtgatgat tgtgtggcag 
    4261 gtagacagga tgaagattag aacatggcat agtttagtaa aatatcatat gtatatttca 
    4321 aagaaagcta aagattggcg ttatagacat cattatgaaa gcaggcatcc aaaagtaagt 
    4381 tcagaagtac acataccatt aggagatgct agattagtag taagaacata ttggggtctg 
    4441 caaacaggag aaagggagtg gcatttgggt catggggtct ccatagaatg gaggataaaa 
    4501 agatatagca cacaaataga tcctgacctg gcagaccaac taattcatct gcatcacttt 
    4561 aactgttttt cagactctgc cataaggaaa gccatattag gacaagtagt tagccctagt 
    4621 tgtgaatatc aagcaggaca taacaaggta ggatctctac aatatttggc actgaaagca 
    4681 ttagtgacac caacaaagat aaagccacct ttgcctagtg ttaggaaatt aacagaggac 
    4741 agatggaaca agccccagaa gaccaggggc cccagaggga accatacaat gaatggacat 
    4801 tagaactgtt agaagagctt aagcatgaag ctgttaggca ttttcctagg ccatggcttc 
    4861 atggattagg acaacatatc tataacacct atggagatac ctgggaagga gttgaagcta 
    4921 taataagaac tttgcaacaa ctactgtttg ttcatttcag aattgggtgc caacatagca 
    4981 gaataggcat cattcgaagg agaagaggca gggatggatc cgatagatcc taatctagag 
    5041 ccctggaacc atccgggaag tcagcctgca actgcttgta gcccatgtta ctgtaaaaag 
    5101 tgttgctatc attgtctaag gtgctttcag accaaaggct taggcatctc ctatggcagg 
    5161 aagaagcgga gacagcgacg aagcgctcct ccaagcagtg aagatcatca aaatcttata 
    5221 tcaaagcagt aagtacaaaa tagtagatgt aatgttagaa gcaatagatt atagattagg 
    5281 aataggagca ttgatagtag cactaatcat agcaatagtt gtgtggacca tagcatatat 
    5341 agaatataga aaattggtaa gacaaaggaa aatagactgg ttaatcaaaa gaattaagga 
    5401 aagagcagaa gacagtggca atgagagtga tggggataca gaggaattgt caacaatggt 
    5461 ggatatgggg catcttaggc ttttggatgg taatgattta taatgtgctg gggaacacgt 
    5521 gggtcacagt ttactatggg gtacccgtgt ggagggatgc agagaccacc ttattttgtg 
    5581 catcagatgc gaaagcatat gagaaagaag tgcataatgt ctgggctaca catgcctgtg 
    5641 tgcctacaga cccaaaccca caagaaatca atttggaaaa tgtgacagaa cagtttaata 
    5701 tgtggaaaaa taacatggta gagcaaatgc acacagatat aattagtcta tgggaccaaa 
    5761 gcctaaagcc atgtgtacag ctaacccctc tctgtgttac tttagagtgt accaattatg 
    5821 cccccaatac tactaatgtc accaagagta ctagtgtccc cgaggaaatg gtaggagaaa 
    5881 taaaaaactg ctctttcaat atgaccacag aattaaggga taagaaacag aaagtatatt 
    5941 cactttttta taaactagat gtagtaccat tggatagcag caataatagc agcaatagta 
    6001 acatcagtca gtatagatta ataaattgta atacctcaac cattacacag gcttgtccaa 
    6061 aggtaacctt tgagccaatt cccatacatt attgtgcccc agctggtttt gcgattctaa 
    6121 aatgtaggga taagaagttc aatggaacag gactatgcaa gaatgtcagc acagtacaat 
    6181 gcacacatgg aatcaagcca gtagtatcaa ctcaactgct gttaaatggc agtctagcag 
    6241 aagaagaggt aatgattaga tctgaaaata ttacagacaa tgccaaaaac ataatagtac 
    6301 aatttaaaaa ctctgtaaat attacttgta tcagacctaa caacaataca agaaaaggtg 
    6361 tacatatagg accagggcaa gcattctatg caacaggtga aataatagga aacataagac 
    6421 aagcacattg taatgtcact agagcaaaat ggaatgacac tttgcaaaag gtagccgaac 
    6481 aattaagaaa acactttagg aataaaacaa taatctttaa tacaaccaca ggaggggatc 
    6541 cagaaataac aacacatagt tttaattgta acggagaatt tttttattgt aacacatcag 
    6601 gcctgtttaa tcacacttac acttggtata atggcagctt gcaggagtca aatagcacgg 
    6661 ggtcagacaa cataactctc caatgcagaa taaagcaaat tataaatatg tggcagagag 
    6721 tgggacaagc tatgtatgcc cctcccattc gaggagtaat acagtgtgaa tcaaacatta 
    6781 caggactaat attaacaaga gatggtggaa ataataatga taatacaact gaaatcttca 
    6841 gacctggagg aggagatatg agggacaatt ggagaagtga attatataag tataaagtag 
    6901 taacaattga accactagga gtagcaccca cccaggcaag gagaagagtg gtggagagag 
    6961 aaaaaagagc agtgggaata ggagctgtcc tccttgggtt cttaggaaca gcaggaagca 
    7021 ctatgggcgc ggcgtccatg acgctgacgg tacaggccag acaattattg tctggcatag 
    7081 tgcaacagca aagcaatttg ctgaaggcta tagaggctca acagcaactg ttgagactca 
    7141 cggtctgggg cattaaacag ctccaggcaa gaatcctagc tgtggaaaga tacctgaagg 
    7201 atcaacagct cctaggaatc tggggctgct ctggaaaact catctgcacc actaatgtgc 
    7261 cctggaacac tagttggagt aataaatccc tgcacgatat atgggataac atgacctgga 
    7321 tgcaatggga taaagaaatt agcaattaca cagagataat atataagcta attgaagaat 
    7381 cgcagaacca gcaggaaaaa aatgagcaag acttattggc attggacaag tgggcagatc 
    7441 tgtggaattg gtttaacata tcaaattggc tatggtatat aagaatattt ataatgatag 
    7501 taggaggctt aataggatta agaatagttt ttgctgtgct ttctataata aatagagtta 
    7561 ggcagggata ctcacctttg tcattccaga cccatgcccc aaacccaggg ggtctcgaca 
    7621 ggcccggaag aatcgaagaa gaaggtggag agcaagacag agacagatcg attcgattag 
    7681 tgagcggatt cttagcactt gcctgggacg acctacggag cctgtgcctc ttcagctacc 
    7741 accgattgag agacttcagc ttgattgcag cgagagctgt ggaacttctg ggacacagca 
    7801 gtctcaaggg actgagactg gggtgggaag gcctcaagta tctgtggaat cttctagcat 
    7861 actggggacg ggaactaaaa attagtgcta ttaatttgct tgataccata gcaatagcag 
    7921 tagctgggtg gacagatagg gttatagaag taggacaaag acttggtaga gctattctca 
    7981 acatacctag aagaattaga cagggcttcg aaagggcttt gctataacat ggggggcaaa 
    8041 tggtcaaaaa ggagcatagt gggatggcct aaggttagag aaagaatagt acaaactgat 
    8101 ccagcagcag agggagtagg agcagcgtct caagacttag ataaacatgg ggcactgaca 
    8161 agcagcaaca cgcctggcaa taatgctact tgtgcctggc tggaagcaca agaggaggac 
    8221 ggcgaggtgg gttttccagt cagacctcag gtacctttaa gaccaatgac ttacaaagga 
    8281 gcgttagatc tcagccactt tttaaaagaa aaggggggac tggatgggtt aatttactct 
    8341 cagaaaaggc aagacatcct tgatttgtgg gtctatcata cacaaggtta cttccctgat 
    8401 tggcagaact acacaccagg gccaggaatc agattcccac taacatttgg atggtgcttc 
    8461 aagctagtgc cagttgaccc aagggaagtg gaagaagcaa ataagggaga gaacaccagc 
    8521 ttgctacacc ccgtgagcct gcatggaatg gaagatgaca acagagaagt attaatatgg 
    8581 aagtttgaca gccacctagc atttaaacac acagcccgcg agctgcatcc ggagtactac 
    8641 aaagactgct gacacagcgc gagctacatc cggactgctg acacagcagg ggcactgggg 
    8701 cggtccggga ggtgtggtct gggcgggatg gggagtggcc aaccctcaga tgctgcatat 
    8761 aagcagctgc ttttcgcttg tactgggtct ctttaggtag accagatctg agcctgggag 
    8821 ctctctggct atctagagaa cccactgct
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.