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LOCUS AF401048 1484 bp DNA linear VRL 12-AUG-2001
DEFINITION HIV-1 isolate RB5-1 from USA nonfunctional envelope glycoprotein,
partial sequence
ACCESSION AF401048
VERSION AF401048.1 GI:15149387
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1484)
Show all sequences for reference 1
AUTHORS Marras,D., Bruggeman,L. and Klotman,P.
TITLE Direct Submission
JOURNAL Submitted (20-JUL-2001) Department of Nephrology, Mount Sinai
School of Medicine, One Gustave L. Levy Place, New York, NY 10029,
USA
REFERENCE 2
Show all sequences for reference 2
AUTHORS Marras,D., Bruggeman,L.A., Gao,F., Tanji,N., Mansukhani,M.M.,
Cara,A., Ross,M.D., Gusella,G.L., Benson,G., D'Agati,V.D.,
Hahn,B.H., Klotman,M.E. and Klotman,P.E.
TITLE Replication and compartmentalization of HIV-1 in kidney epithelium
of patients with HIV-associated nephropathy
JOURNAL Nat. Med. 8 (5), 522-526 (2002)
PUBMED 11984599
FEATURES Location/Qualifiers
source 1..1484
/organism="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="RB5-1"
/db_xref="taxon:11676"
/country="USA"
/note="derived from kidney tubular epithelial cell of
patient"
misc_feature 1..>1484
/note="nonfunctional envelope glycoprotein due to
mutation; gp120"
BASE COUNT 558 a 249 c 307 g 370 t
ORIGIN
1 atgagagtga aggagaaata tcagcacttg tggagagggg gcatcttgct ccttgggata
61 ttaatgatca gtagtgctgc agaacaatcg tgggtcacag tctattatgg ggtacctgtg
121 tggaaagaag ctactaccac tctattttgt gcatcagatg ctaaagcata tgaaacagag
181 gtacataatg tttgggccac acatgcctgt gtacccacag accccagccc acaagaacaa
241 agattgggaa atgtgacaga atattttaac atgtggaaaa ataacatggt agaacagatg
301 catgaggata taattagttt gtgggatcaa agcccaaagc catgtgtaaa attaacccca
361 ctctgtgtta ctctaaattg cactgatgtg acgaatacta ctactattaa tggtactgcc
421 actactaata tcactatcga ggaaaaaatg aagggagaag taaaaaactg ctctttcaat
481 atcaccacaa gcataagaga taagaaacag aaagaatatg cacctttttt ataaccttga
541 tgtagtacca ataaatgatg ataatactag ctataggttg ataagttgta acacctcagt
601 cattacacag gcctgtccaa aggtatcctt tgagccaatt cccgtacatt attgtgcccc
661 ggcaggtttt gcgattctaa aatgtaataa taagacattc aatggaaaag gactatgtac
721 aaatgttagc acagtacaat gtacacacgg aattaggcca gtggtatcaa ctcaactgct
781 attaaatggc agcctagcag aagaagagat agtaattaga tctgaaaatt tcacagacaa
841 tactaaaacc ataatagtac agctgaacaa atctgtagta attaattgta caagacccaa
901 caacaataca agaaaaagta tacatatagg accagggagc gcattttatg caacaggaga
961 gataatagga aatataagac aagcatattg caccgttaat ggaacagaat ggaataacac
1021 tctaaaacag atagttgaaa aattaagagg acaatttggg aataatacaa caatagtctt
1081 taatcaatcc tcaggagggg atccagaaat tgtaatgcac aattttaatt gtggggggga
1141 atttttctac tgtaattcgt caggactgtt taatagtact tggagtattg ataatgaaga
1201 gtcaaataac actgaaggca acagcacact catcacactc ccatgcagaa taaaacaaat
1261 tatagacatg tggcaggaag taggaaaagc aatgtatgcc cctcccatca gaggacaaat
1321 taactgttta tcaaatatta cagggctgtt attaacaaga gatggtggta ataacacaaa
1381 cgggactgag atcttcagac ctggaggagg agatatgagg gacaattgga gaagtgaatt
1441 atataaatat aaagtagtac aagttgaacc attaggaata gcac
//
last modified: Tue May 31 10:56 2022