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LOCUS	    AF357672		    1269 bp    DNA     linear	VRL 23-MAY-2002
DEFINITION  HIV1 isolate 501979I021298 from USA pol protein (pol) gene, partial
	    cds
ACCESSION   AF357672
VERSION     AF357672.1 GI:13958848
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1269)
            Show all sequences for reference 1
  AUTHORS   Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
	    Wei,L.-J., Cunningham,S., Wantman,M., Wiznia,A., Johnson,G.,
	    Nachman,S. and Palumbo,P.
  TITLE     Analysis of human immunodeficiency virus type 1 drug resistance in
	    children receiving nucleoside analogue reverse-transcriptase
	    inhibitors plus nevirapine, nelfinavir, or ritonavir (Pediatric
	    AIDS Clinical Trials Group 377)
  JOURNAL   J. Infect. Dis. 183 (12), 1732-1738 (2001)
  PUBMED    11372025
REFERENCE   2 (bases 1 to 1269)
            Show all sequences for reference 2
  AUTHORS   Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
	    Wei,L.-J., Cunningham,S., Wantman,M., Nachman,S., Wiznia,A.,
	    Johnson,G. and Palumbo,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2001) Center for Biostatistics in AIDS Research,
	    Harvard School of Public Health, 651 Huntington Avenue, Boston, MA
	    02115-6017, USA
FEATURES             Location/Qualifiers
     source	     1..1269
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="501979I021298"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="subtype: B"
     gene	     <1..>1269
		     /gene="pol"
     CDS	     <1..>1269
		     /gene="pol"
		     /note="protease/reverse transcriptase region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAK50983.1"
		     /db_xref="GI:13958849"
		     /translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVRQYDQVNVEICGHKAVGTVLIGDTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     XVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLWKWGFYTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVI
		     PLTEEAELELAENREILKEPVHGVYYDPSKD"
BASE COUNT	497 a	 209 c	  272 g    286 t      5 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa aggtaggggg gcaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtgag acagtatgat 
     181 caggtaaayg tagaaatctg tggacataaa gctgtaggta cagtattaat aggagataca 
     241 cctgtcaaca taattggaag aaacctgttg actcagattg gttgcactct aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcactag tagaaatttg tacagaattg 
     421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagagaactc aagacttttg ggaagtccaa ttaggaatac cacatcccgc rgggttaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggcgatgcat atttttcagt tcccttagat 
     661 aaagaattca ggaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg 
     721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacwt rgttatctat 
     841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa 
     901 atagaggaac tgagacaaca tctrtggaag tggggatttt acacaccaga caaaaaacat 
     961 cagaaagagc cgccattcct ctggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagcctatag tattgccaga aaaagacagc tggactgtca atgacataca gaagttagtg 
    1081 ggaaaattga attgggcaag tcagatttac ccagggatta aagtaaggca attatgtaaa 
    1141 ctccttaggg gaaccaaggc actaacagaa gtaataccac taacagaaga agcagagcta 
    1201 gaactggcag aaaacaggga aattctaaaa gaaccagtac atggagtgta ctatgaccca 
    1261 tcaaaagac
//
last modified: Tue May 31 10:56 2022


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