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LOCUS AF357672 1269 bp DNA linear VRL 23-MAY-2002
DEFINITION HIV1 isolate 501979I021298 from USA pol protein (pol) gene, partial
cds
ACCESSION AF357672
VERSION AF357672.1 GI:13958848
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1269)
Show all sequences for reference 1
AUTHORS Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
Wei,L.-J., Cunningham,S., Wantman,M., Wiznia,A., Johnson,G.,
Nachman,S. and Palumbo,P.
TITLE Analysis of human immunodeficiency virus type 1 drug resistance in
children receiving nucleoside analogue reverse-transcriptase
inhibitors plus nevirapine, nelfinavir, or ritonavir (Pediatric
AIDS Clinical Trials Group 377)
JOURNAL J. Infect. Dis. 183 (12), 1732-1738 (2001)
PUBMED 11372025
REFERENCE 2 (bases 1 to 1269)
Show all sequences for reference 2
AUTHORS Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
Wei,L.-J., Cunningham,S., Wantman,M., Nachman,S., Wiznia,A.,
Johnson,G. and Palumbo,P.
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2001) Center for Biostatistics in AIDS Research,
Harvard School of Public Health, 651 Huntington Avenue, Boston, MA
02115-6017, USA
FEATURES Location/Qualifiers
source 1..1269
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="501979I021298"
/db_xref="taxon:11676"
/country="USA"
/note="subtype: B"
gene <1..>1269
/gene="pol"
CDS <1..>1269
/gene="pol"
/note="protease/reverse transcriptase region"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAK50983.1"
/db_xref="GI:13958849"
/translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEEMNLPGRWKP
KMIGGIGGFIKVRQYDQVNVEICGHKAVGTVLIGDTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
XVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLWKWGFYTPDKKHQKEPPFLWMGYELH
PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVI
PLTEEAELELAENREILKEPVHGVYYDPSKD"
BASE COUNT 497 a 209 c 272 g 286 t 5 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa aggtaggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtgag acagtatgat
181 caggtaaayg tagaaatctg tggacataaa gctgtaggta cagtattaat aggagataca
241 cctgtcaaca taattggaag aaacctgttg actcagattg gttgcactct aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcactag tagaaatttg tacagaattg
421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttttg ggaagtccaa ttaggaatac cacatcccgc rgggttaaaa
601 aagaaaaaat cagtaacagt actggatgtg ggcgatgcat atttttcagt tcccttagat
661 aaagaattca ggaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacwt rgttatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa
901 atagaggaac tgagacaaca tctrtggaag tggggatttt acacaccaga caaaaaacat
961 cagaaagagc cgccattcct ctggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctatag tattgccaga aaaagacagc tggactgtca atgacataca gaagttagtg
1081 ggaaaattga attgggcaag tcagatttac ccagggatta aagtaaggca attatgtaaa
1141 ctccttaggg gaaccaaggc actaacagaa gtaataccac taacagaaga agcagagcta
1201 gaactggcag aaaacaggga aattctaaaa gaaccagtac atggagtgta ctatgaccca
1261 tcaaaagac
//
last modified: Tue May 31 10:56 2022