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LOCUS	    AF357615		    1269 bp    DNA     linear	VRL 23-MAY-2002
DEFINITION  HIV1 isolate 361047l020698 from USA pol protein (pol) gene, partial
	    cds
ACCESSION   AF357615
VERSION     AF357615.1 GI:13958734
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1269)
            Show all sequences for reference 1
  AUTHORS   Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
	    Wei,L.-J., Cunningham,S., Wantman,M., Wiznia,A., Johnson,G.,
	    Nachman,S. and Palumbo,P.
  TITLE     Analysis of human immunodeficiency virus type 1 drug resistance in
	    children receiving nucleoside analogue reverse-transcriptase
	    inhibitors plus nevirapine, nelfinavir, or ritonavir (Pediatric
	    AIDS Clinical Trials Group 377)
  JOURNAL   J. Infect. Dis. 183 (12), 1732-1738 (2001)
  PUBMED    11372025
REFERENCE   2 (bases 1 to 1269)
            Show all sequences for reference 2
  AUTHORS   Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
	    Wei,L.-J., Cunningham,S., Wantman,M., Nachman,S., Wiznia,A.,
	    Johnson,G. and Palumbo,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2001) Center for Biostatistics in AIDS Research,
	    Harvard School of Public Health, 651 Huntington Avenue, Boston, MA
	    02115-6017, USA
FEATURES             Location/Qualifiers
     source	     1..1269
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="361047l020698"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="subtype: B"
     gene	     <1..>1269
		     /gene="pol"
     CDS	     <1..>1269
		     /gene="pol"
		     /note="protease/reverse transcriptase region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAK50926.1"
		     /db_xref="GI:13958735"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKP
		     KMIGGIGGFIKVRQYDQITIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPRVKQWPLTEEKIRALVEICXEMEXEGKISRVGPENPYNTPVF
		     AIKKKNSTRWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIP
		     LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKQNPD
		     IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLFTPDXKHQKEPPFLWMGYELH
		     PDKWTVQPIVLPEKESWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKSLTEVI
		     PLTEEAELELAENREILKEPVHGVYYDPSKD"
BASE COUNT	497 a	 202 c	  269 g    296 t      5 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gttacaataa agataggggg gcaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgag tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 
     181 cagataacca tagaaatctg tggacataaa gctataggta cagtattagt gggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagattg gttgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaagagtt 
     361 aaacaatggc cattgacaga agaaaaaata agagcattag tagaaatttg traagaaatg 
     421 gaarargaag ggaaaatttc aagagttggg cctgaaaatc catacaatac tccagtattt 
     481 gccataaaga aaaaaaacag tactagatgg agaaaattag tagattttag agaacttaat 
     541 aagaaaactc aagacttctg ggaagtycaa ttagggatac cacatcccgc aggattaaaa 
     601 aagaaaaaat cagtaacagt actagatgtg ggtgatgcat atttttcaat tcccttagat 
     661 aaagacttca gaaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg 
     721 attagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga taaaaatctt agagcctttt agaaaacaaa atccagacat agttatctat 
     841 caatacatgg atgatttgta tgtagggtct gatttagaaa taggacagca tagaacaaaa 
     901 atagaggaac tgagacaaca tctgttgagg tggggacttt tcacaccaga cmaaaaacac 
     961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagcctatag tactgccaga aaaagagagc tggactgtca atgacataca aaagttagtg 
    1081 ggaaaattga attgggcaag tcagatttat gcagggatta aagtaaggca attatgtaaa 
    1141 ctccttaggg gaactaaatc actaacagaa gtaataccac tgacagaaga agcagagcta 
    1201 gaactggcag aaaacaggga gattctaaaa gaaccagtac atggggtgta ttatgaccca 
    1261 tcaaaagac
//
last modified: Tue May 31 10:56 2022


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