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LOCUS AF357615 1269 bp DNA linear VRL 23-MAY-2002
DEFINITION HIV1 isolate 361047l020698 from USA pol protein (pol) gene, partial
cds
ACCESSION AF357615
VERSION AF357615.1 GI:13958734
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1269)
Show all sequences for reference 1
AUTHORS Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
Wei,L.-J., Cunningham,S., Wantman,M., Wiznia,A., Johnson,G.,
Nachman,S. and Palumbo,P.
TITLE Analysis of human immunodeficiency virus type 1 drug resistance in
children receiving nucleoside analogue reverse-transcriptase
inhibitors plus nevirapine, nelfinavir, or ritonavir (Pediatric
AIDS Clinical Trials Group 377)
JOURNAL J. Infect. Dis. 183 (12), 1732-1738 (2001)
PUBMED 11372025
REFERENCE 2 (bases 1 to 1269)
Show all sequences for reference 2
AUTHORS Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
Wei,L.-J., Cunningham,S., Wantman,M., Nachman,S., Wiznia,A.,
Johnson,G. and Palumbo,P.
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2001) Center for Biostatistics in AIDS Research,
Harvard School of Public Health, 651 Huntington Avenue, Boston, MA
02115-6017, USA
FEATURES Location/Qualifiers
source 1..1269
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="361047l020698"
/db_xref="taxon:11676"
/country="USA"
/note="subtype: B"
gene <1..>1269
/gene="pol"
CDS <1..>1269
/gene="pol"
/note="protease/reverse transcriptase region"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAK50926.1"
/db_xref="GI:13958735"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKP
KMIGGIGGFIKVRQYDQITIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPRVKQWPLTEEKIRALVEICXEMEXEGKISRVGPENPYNTPVF
AIKKKNSTRWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIP
LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLFTPDXKHQKEPPFLWMGYELH
PDKWTVQPIVLPEKESWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKSLTEVI
PLTEEAELELAENREILKEPVHGVYYDPSKD"
BASE COUNT 497 a 202 c 269 g 296 t 5 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gttacaataa agataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgag tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat
181 cagataacca tagaaatctg tggacataaa gctataggta cagtattagt gggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gttgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaagagtt
361 aaacaatggc cattgacaga agaaaaaata agagcattag tagaaatttg traagaaatg
421 gaarargaag ggaaaatttc aagagttggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaaaacag tactagatgg agaaaattag tagattttag agaacttaat
541 aagaaaactc aagacttctg ggaagtycaa ttagggatac cacatcccgc aggattaaaa
601 aagaaaaaat cagtaacagt actagatgtg ggtgatgcat atttttcaat tcccttagat
661 aaagacttca gaaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga taaaaatctt agagcctttt agaaaacaaa atccagacat agttatctat
841 caatacatgg atgatttgta tgtagggtct gatttagaaa taggacagca tagaacaaaa
901 atagaggaac tgagacaaca tctgttgagg tggggacttt tcacaccaga cmaaaaacac
961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctatag tactgccaga aaaagagagc tggactgtca atgacataca aaagttagtg
1081 ggaaaattga attgggcaag tcagatttat gcagggatta aagtaaggca attatgtaaa
1141 ctccttaggg gaactaaatc actaacagaa gtaataccac tgacagaaga agcagagcta
1201 gaactggcag aaaacaggga gattctaaaa gaaccagtac atggggtgta ttatgaccca
1261 tcaaaagac
//
last modified: Tue May 31 10:56 2022