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LOCUS AF308528 1542 bp DNA linear VRL 28-NOV-2000
DEFINITION HIV-1 isolate A28742 from Argentina pol protein (pol) gene, partial
cds
ACCESSION AF308528
VERSION AF308528.1 GI:11385966
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1542)
Show all sequences for reference 1
AUTHORS Thomson,M.M., Villahermosa,M.L., Vazquez-de Parga,E., Cuevas,M.T.,
Delgado,E., Manjon,N., Medrano,L., Perez-Alvarez,L., Contreras,G.,
Gomez-Carrillo,M., Salomon,H. and Najera,R.
TITLE Widespread circulation of a B/F intersubtype recombinant form among
HIV-1-infected individuals in Buenos Aires, Argentina
JOURNAL AIDS 14 (7), 897-899 (2000)
PUBMED 10839601
REFERENCE 2 (bases 1 to 1542)
Show all sequences for reference 2
AUTHORS Thomson,M.M., Villahermosa,M.L., Vazquez-de Parga,E., Cuevas,M.T.,
Delgado,E., Manjon,N., Medrano,L., Perez-Alvarez,L., Contreras,G.,
Gomez-Carrillo,M., Salomon,H. and Najera,R.
TITLE Direct Submission
JOURNAL Submitted (26-SEP-2000) Centro Nacional de Biologia Fundamental,
Instituto de Salud Carlos III, Ctra. Majadahonda-Pozuelo, Km. 2,
Majadahonda, Madrid 28220, Spain
FEATURES Location/Qualifiers
source 1..1542
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="A28742"
/db_xref="taxon:11676"
/country="Argentina"
/note="subtype: BF recombinant"
gene <1..>1542
/gene="pol"
CDS <1..>1542
/gene="pol"
/note="reverse transcriptase region"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAG35047.1"
/db_xref="GI:11385967"
/translation="ISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEV
QLGIPLPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIRYQYNV
LPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGHHRAKIEDLR
QHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKL
NWASQIYPGIKVKQLCRLLRGPKALTEVIPLTKEAELELAENREILKEPVHGVYYDPS
KDLVAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESI
VIWGKTPKFRLPIQKETWDTWWTEYWQATWIPEWEFVNTPPLVKLWYQLETEPIEGAE
TFYVDGASNRETKKGKAGYVTDRGRQKAVSLTETTNQKTELHAIQLALQDSGSEVNIV
TDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLSWVPAHKGIGGNEQVDKLVSA
GIRKIL"
BASE COUNT 606 a 266 c 335 g 335 t
ORIGIN
1 atttcaaaga ttgggcctga aaatccatat aatactccag tatttgccat aaagaaaaaa
61 gacagtacta aatggaggaa attagtagac ttcagagaac ttaataaaag aactcaagat
121 ttttgggagg ttcaattagg aataccactt cctgcagggt taaaaaagaa aaaatcagta
181 acagtgctgg atgtggggga tgcatatttt tcagtcccct tagataagga tttcaggaag
241 tacactgcat tcaccatacc tagtgtcaac aatgagacac caggaattag gtaccagtac
301 aatgtgcttc cacagggatg gaaaggatca ccagcaatat tccaaagcag catgacaaaa
361 atcttagagc cttttagaaa acaaaatccg gatatagtta tctatcaata catggatgat
421 ttgtatgtag gatctgactt agaaataggg catcatagag caaaaataga ggacctgaga
481 caacatctgt taaggtgggg atttaccaca ccagacaaaa aacatcagaa agaacctcca
541 ttcctttgga tgggttatga actccatcct gataaatgga cagtacagcc tatagtgctg
601 ccagaaaaag acagctggac tgtcaatgac atacagaagt tagtgggaaa attgaattgg
661 gcaagtcaga tttacccagg gattaaagta aagcaattgt gtagactcct taggggaccc
721 aaggcactaa cagaagtaat accactaaca aaagaagcag agctagaact ggcagaaaac
781 agggaaattc taaaagaacc agtacatgga gtgtattatg acccctcaaa agacttagta
841 gcagaaatac agaagcaggg gcaaggccaa tggacatatc aaatttatca agagccattt
901 aaaaatctga aaacaggaaa atatgcaaga atgaggggtg cccacactaa tgatgtaaaa
961 caattaacag aggcagtgca aaaaataacc acagaaagca tagtaatatg gggaaagact
1021 cctaagttta gactacccat acaaaaagag acatgggaca catggtggac agagtattgg
1081 caggctacct ggattcctga atgggagttt gtcaataccc ctcctctagt aaaactatgg
1141 tatcagttag aaacagagcc catagaagga gcagaaactt tctatgtaga tggggcatct
1201 aatagagaga ccaaaaaagg aaaagcagga tatgttactg acagaggaag acaaaaagct
1261 gtttccctaa ctgagaccac aaatcagaag actgagttac acgcaattca gttagcttta
1321 caggattcag gatcagaagt gaacatagta acagactcac agtatgcatt aggaatcatt
1381 caagcacaac cagataagag tgaatcagag ttagtcaatc aaataataga gcaattaata
1441 aaaaaggaaa aggtctacct gtcatgggta ccagcacaca aagggattgg aggaaatgaa
1501 caagtagata aattagtcag tgctggaatc agaaaaatac tg
//
last modified: Tue May 31 10:56 2022