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LOCUS AF254714 718 bp DNA linear VRL 15-MAR-2002
DEFINITION HIV-1 clone NT51/.17 from Tanzania 5' long terminal repeat,
complete sequence
ACCESSION AF254714
VERSION AF254714.1 GI:13897608
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 718)
Show all sequences for reference 1
AUTHORS Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
Essex,M.
TITLE HIV-1 LTR subtype and perinatal transmission
JOURNAL Virology 287 (2), 261-265 (2001)
PUBMED 11531404
REFERENCE 2 (bases 1 to 718)
Show all sequences for reference 2
AUTHORS Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
Essex,M.
TITLE The long terminal repeat of the human immunodeficiency virus type 1
contains determinants associated with perinatal transmission
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 718)
Show all sequences for reference 3
AUTHORS Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
Essex,M.
TITLE Direct Submission
JOURNAL Submitted (10-APR-2000) Department of Immunology and Infectious
Diseases, Harvard AIDS Institute and the Harvard School of Public
Health, 651 Huntington Avenue, Boston, MA 02445, USA
COMMENT Sample date is approximate; study recruitment dates were 4/1995 -
7/1997, and continued 18 mos post-recruitment (Fawzi et al, 1999;
PMID 10839660).
FEATURES Location/Qualifiers
source 1..718
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/db_xref="taxon:11676"
/clone="NT51/.17"
/country="Tanzania"
/note="isolated from peripheral blood mononuclear cells"
LTR 1..718
/note="5'' long terminal repeat (U3 through 5''UTR)"
BASE COUNT 193 a 164 c 211 g 149 t 1 other
ORIGIN
1 caaggatcct tccctgattg gcagaactcc acaccagggc cagggaccag gttcccacta
61 acgtttggat ggtgcttcaa actagtacca gttgagccag atgaagtaga gaaggctacc
121 gaaggagaga acaacagcct attacaccct atatgccaac atggaatgga tgatgaagag
181 agagagacat taatgtggaa gtttgacagc cgcctggcac taaaacaccg agccaaagag
241 ctgcatccgg agttctacaa agactgctga cacagaagtt gctgacaggg actttccgct
301 ggggactttc caggggaggt gtggtttggg cggagttggg gagtggctaa ccctcagaag
361 ctgcatataa gcagccgctt ttcgcttgta ctgggtctct ctggtagacc agattgagcc
421 tgggagctct ctggctagca ggggaaccca ctgcttaaag cctcaataaa gcttgccttg
481 agtgcctcaa gcagtgtgtg cccgtctgtt gtgtgactct ggtaactaga gatccctcag
541 accactttag actgagtaaa aatctctagc agtggcgccc gaacagggac tcgaaagcga
601 aagttccaga gaagttctct cgacgcagga ctcgggatga tgaggtgcac acagcaagag
661 gcgagagcgg ngactggtga gtacgccaat ttttgactag cggagggtag aaggagag
//
last modified: Tue May 31 10:56 2022