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LOCUS AF254703 625 bp DNA linear VRL 15-MAR-2002
DEFINITION HIV-1 clone NT37.26/ from Tanzania 5' long terminal repeat,
complete sequence
ACCESSION AF254703
VERSION AF254703.1 GI:13897597
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 625)
Show all sequences for reference 1
AUTHORS Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
Essex,M.
TITLE HIV-1 LTR subtype and perinatal transmission
JOURNAL Virology 287 (2), 261-265 (2001)
PUBMED 11531404
REFERENCE 2 (bases 1 to 625)
Show all sequences for reference 2
AUTHORS Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
Essex,M.
TITLE The long terminal repeat of the human immunodeficiency virus type 1
contains determinants associated with perinatal transmission
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 625)
Show all sequences for reference 3
AUTHORS Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
Essex,M.
TITLE Direct Submission
JOURNAL Submitted (10-APR-2000) Department of Immunology and Infectious
Diseases, Harvard AIDS Institute and the Harvard School of Public
Health, 651 Huntington Avenue, Boston, MA 02445, USA
COMMENT Sample date is approximate; study recruitment dates were 4/1995 -
7/1997, and continued 18 mos post-recruitment (Fawzi et al, 1999;
PMID 10839660).
FEATURES Location/Qualifiers
source 1..625
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/db_xref="taxon:11676"
/clone="NT37.26/"
/country="Tanzania"
/note="isolated from peripheral blood mononuclear cells"
LTR 1..625
/note="5'' long terminal repeat (U3 through 5''UTR)"
BASE COUNT 178 a 136 c 166 g 145 t
ORIGIN
1 ctcaggtacc tttaagacca atgacttaca aggaagctgt agatttgagc cactttttaa
61 aagaaaaggg gggactggaa gggttaattt ggtcccagaa aagacaagag atccttgatc
121 tttgggtcta tcatacacaa ggcatcttcc ctgattggca aaactacaca ccagggccag
181 gggttagata tccactgacc tttgggtggt gcttcgagct agtaccagtg gacgaagatg
241 aagtagaaga ggacactgaa ggagagaaca actgcttgtt acaccctaag tgccagcatg
301 gaatggatga cccggacaga gaagtgttaa agtggagatt taacagcaaa ctggcatttg
361 aacataaggc ccgaataaag catccagagt tctacaaaga ctgctgacag ctctacaaag
421 actgctgaca ctgagttttc tacaggggac tttccgctgg ggactttcca gagaggcgta
481 cccgggggcg ggactgggag tggctaaccc tcagatgctg catataagca gctgcttttt
541 gcctgtactg ggtctctctt gctagaccag atttgagcct gagagctctc tggctagcta
601 gggaacccac tgcttaagcc tcaat
//
last modified: Tue May 31 10:56 2022