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LOCUS	    AF254694		     725 bp    DNA     linear	VRL 15-MAR-2002
DEFINITION  HIV-1 clone NT25.4/ from Tanzania 5' long terminal repeat, complete
	    sequence
ACCESSION   AF254694
VERSION     AF254694.1 GI:13897588
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 725)
            Show all sequences for reference 1
  AUTHORS   Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
	    Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
	    Essex,M.
  TITLE     HIV-1 LTR subtype and perinatal transmission
  JOURNAL   Virology 287 (2), 261-265 (2001)
  PUBMED    11531404
REFERENCE   2 (bases 1 to 725)
            Show all sequences for reference 2
  AUTHORS   Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
	    Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
	    Essex,M.
  TITLE     The long terminal repeat of the human immunodeficiency virus type 1
	    contains determinants associated with perinatal transmission
  JOURNAL   Unpublished
REFERENCE   3 (bases 1 to 725)
            Show all sequences for reference 3
  AUTHORS   Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
	    Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
	    Essex,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-APR-2000) Department of Immunology and Infectious
	    Diseases, Harvard AIDS Institute and the Harvard School of Public
	    Health, 651 Huntington Avenue, Boston, MA 02445, USA
COMMENT     Sample date is approximate; study recruitment dates were 4/1995 -
	    7/1997, and continued 18 mos post-recruitment (Fawzi et al, 1999;
	    PMID 10839660).
FEATURES             Location/Qualifiers
     source	     1..725
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /db_xref="taxon:11676"
		     /clone="NT25.4/"
		     /country="Tanzania"
		     /note="isolated from peripheral blood mononuclear cells"
     LTR	     1..725
		     /note="5'' long terminal repeat (U3 through 5''UTR)"
BASE COUNT	192 a	 166 c	  207 g    160 t
ORIGIN
       1 atccttccct gattggcaga actgcacacc agggccaggg accaggttcc cactaacatt 
      61 tggatggtgc ttcaagctag taccagttga tccagaagca gtagagaagg ctaatgaggg 
     121 agagaacaac agcttattac accctatatg ccagcatggg atggatgatg atgagaaaga 
     181 agtattaatg tggaagtttg acagcaaact ggcattaaga cacctagccc gagagatgca 
     241 tccggagttc tacaaagact gctgacacag actgctgaca cagaagttgc tgacagagct 
     301 ttccgctggg gactttccag gggaggtgtg gtttgggcgg agttggggag tggctaaccc 
     361 tcagatgctg catataagca gctgcttttc gcctgtactg ggtctctctt gttagaccag 
     421 atcgagcctg ggagctctct gcctagcaag ggaacccact gcttaagccc caataaagct 
     481 tgccttgagt gcttcaagta gtgtgtgccc gtctgttgtg tgactctggt aactagagat 
     541 ccctcagacc actctagact gaataaaaat ctctagcagt ggcgcccgaa cagggactcg 
     601 aaagcgaaag ttccagagaa gttctctcga cgcaggactc ggcttgctga ggtgcacaca 
     661 gcaagaggcg agagcggcga ctggtgagta cgccaatttt tgactagcgg aggctagaag 
     721 gagag
//
last modified: Tue May 31 10:56 2022


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