HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AF093932		     637 bp    DNA     linear	VRL 13-OCT-2000
DEFINITION  HIV-1 isolate 313-2-3-3 from USA, envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   AF093932
VERSION     AF093932.1 GI:4019359
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 637)
            Show all sequences for reference 1
  AUTHORS   Zhang,L., Ramratnam,B., Tenner-Racz,K., He,Y., Vesanen,M.,
	    Lewin,S., Talal,A., Racz,P., Perelson,A.S., Korber,B.T.,
	    Markowitz,M. and Ho,D.D.
  TITLE     Quantifying residual HIV-1 replication in patients receiving
	    combination antiretroviral therapy
  JOURNAL   N. Engl. J. Med. 340 (21), 1605-1613 (1999)
  PUBMED    10341272
REFERENCE   2 (bases 1 to 637)
            Show all sequences for reference 2
  AUTHORS   Zhang,L. and Ho,D.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-1998) Aaron Diamond AIDS Research Center,
	    Rockefeller University, 455 First Avenue, 7th Floor, New York, NY
	    10016, USA
FEATURES             Location/Qualifiers
     source	     1..637
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="313-2-3-3"
		     /db_xref="taxon:11676"
		     /country="USA"
     gene	     <1..>637
		     /gene="env"
     CDS	     <1..>637
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAC95624.1"
		     /db_xref="GI:4019360"
		     /translation="QLLLNGSLSEGEVVIRSENFTNNAKTIIVQLNETVEINCTRPNN
		     NTRKSIHIGPGRAFYATGDIIGNIRHAHCNVSREKWNKTLELIVNKLREQFNINKTIV
		     FSPSSGGDPEIVTHNFNCGGEFFYCNSTPLFNSTWNGTTVKYGTNDTGQNITLQCRIK
		     QIINMWQEVGKAMYAPPISGLIRCSSNITGLLLTRDGGNNSNDTEIFRPGGG"
BASE COUNT	257 a	  99 c	  125 g    156 t
ORIGIN
       1 caattgctgt taaatggtag tctgtcagaa ggagaggtag taattagatc tgaaaatttc 
      61 acaaacaatg ctaaaaccat aatagtacag ctgaatgaaa ctgtagaaat taattgtaca 
     121 agacccaaca acaatacaag aaaaagtata catataggac cagggagagc attttatgca 
     181 acaggagaca taataggaaa tataagacat gcacattgta atgttagtag agaaaaatgg 
     241 aataaaactt tagaactgat agttaacaaa ttaagagaac aatttaacat taacaaaaca 
     301 atagtcttta gtccatcctc aggaggggac ccagaaattg taacgcacaa ttttaattgt 
     361 ggaggggaat ttttctactg taattcaaca cccctgttta atagtacttg gaatggtact 
     421 acagtgaaat atggtacaaa tgacactgga caaaatatca cactccaatg cagaataaaa 
     481 caaattataa acatgtggca ggaggtagga aaagcaatgt acgcccctcc catcagtgga 
     541 ctaattagat gctcatcaaa tattacaggg ctgctattaa caagagatgg tggtaataat 
     601 agcaacgata ctgaaatctt cagacctgga ggaggag
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.