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LOCUS AF085105 297 bp RNA linear VRL 13-APR-2001
DEFINITION HIV-1 isolate PCCPROT20 from USA, protease (pol) gene, partial cds
ACCESSION AF085105
VERSION AF085105.1 GI:6179760
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Zolopa,A.R., Shafer,R.W., Warford,A., Montoya,J.G., Hsu,P.,
Katzenstein,D., Merigan,T.C. and Efron,B.
TITLE HIV-1 genotypic resistance patterns predict response to
saquinavir-ritonavir therapy in patients in whom previous protease
inhibitor therapy had failed
JOURNAL Ann. Intern. Med. 131 (11), 813-821 (1999)
PUBMED 10610625
REFERENCE 2 (bases 1 to 297)
Show all sequences for reference 2
AUTHORS Shafer,R.W., Zolopa,A.R., Warford,A., Montoya,J.G., Katzenstein,D.,
Hsu,P.T., Merigan,T.C. and Efron,B.
TITLE Direct Submission
JOURNAL Submitted (21-AUG-1998) Division of Infectious Diseases, Stanford
University Medical Center, Room S-156, Stanford, CA 94305, USA
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="PCCPROT20"
/db_xref="taxon:11676"
/country="USA"
/note="AZT, DDI, D4T, 3TC, IDV"
gene <1..>297
/gene="pol"
CDS <1..>297
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAF05647.1"
/db_xref="GI:6179814"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEXNLPGRWKP
KMIGGIGGFIKVRQYDQIPIEICGHKTIGTVLIGPTPVNIIGRNLLTQIGCTLNF"
BASE COUNT 105 a 49 c 62 g 71 t 10 other
ORIGIN
1 cctcaratca ctctttggca rcgacccctc gtcacaataa agataggrgg gcarctaaag
61 gaagctctat tagatacagg agcagatgay acagtattag aagaamtraa tttgccagga
121 agatggaarc caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagataccca tagaaatctg tggrcataaa actataggta cagtattaat aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gctgcacytt aaatttt
//
last modified: Tue May 31 10:56 2022