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LOCUS	    AF085092		     297 bp    RNA     linear	VRL 13-APR-2001
DEFINITION  HIV-1 isolate PCCPROT7 from USA, protease (pol) gene, partial cds
ACCESSION   AF085092
VERSION     AF085092.1 GI:6179747
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Zolopa,A.R., Shafer,R.W., Warford,A., Montoya,J.G., Hsu,P.,
	    Katzenstein,D., Merigan,T.C. and Efron,B.
  TITLE     HIV-1 genotypic resistance patterns predict response to
	    saquinavir-ritonavir therapy in patients in whom previous protease
	    inhibitor therapy had failed
  JOURNAL   Ann. Intern. Med. 131 (11), 813-821 (1999)
  PUBMED    10610625
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Shafer,R.W., Zolopa,A.R., Warford,A., Montoya,J.G., Katzenstein,D.,
	    Hsu,P.T., Merigan,T.C. and Efron,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-1998) Division of Infectious Diseases, Stanford
	    University Medical Center, Room S-156, Stanford, CA 94305, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="PCCPROT7"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="AZT, 3TC, IDV"
     gene	     <1..>297
		     /gene="pol"
     CDS	     <1..>297
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAF05634.1"
		     /db_xref="GI:6179801"
		     /translation="PQITLWQRPIVTIKIGGQQKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVRQYDQIPIEICGHRAISTVLIGPTPVNIIGRNLLTQIGCTLNF"
BASE COUNT	114 a	  44 c	   63 g     74 t      2 other
ORIGIN
       1 cctcaaatca ctctttggca acgacccatt gtcacaataa aaataggggg gcaacaaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagataccca tagaaatctg tggacataga gctataagta cagtattaat aggacctaca 
     241 cctgtyaaya taattggaag aaatctgtta actcagattg gttgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022


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