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LOCUS	    AF027788		     618 bp    DNA     linear	VRL 02-APR-1998
DEFINITION  HIV-1 isolate C-499Nef-I19C from USA, nef protein (nef) gene,
	    partial cds
ACCESSION   AF027788
VERSION     AF027788.1 GI:2992591
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 618)
            Show all sequences for reference 1
  AUTHORS   Wei,Q. and Fultz,P.N.
  TITLE     Extensive diversification of human immunodeficiency virus type 1
	    subtype B strains during dual infection of a chimpanzee that
	    progressed to AIDS
  JOURNAL   J. Virol. 72 (4), 3005-3017 (1998)
  PUBMED    9525623
REFERENCE   2 (bases 1 to 618)
            Show all sequences for reference 2
  AUTHORS   Wei,Q. and Fultz,P.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-1997) Microbiology, University of Alabama at
	    Birmingham, BBRB 511, Birmingham, AL 35294-2170, USA
COMMENT     Sequence from chimpanzee C499 infected with strains SF2 and LAI.
FEATURES             Location/Qualifiers
     source	     1..618
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="C-499Nef-I19C"
		     /db_xref="taxon:11676"
		     /note="from chimpanzees housed in the US"
     gene	     1..>618
		     /gene="nef"
     CDS	     1..>618
		     /gene="nef"
		     /codon_start="1"
		     /transl_table="1"
		     /product="nef protein"
		     /protein_id="AAC40633.1"
		     /db_xref="GI:2992592"
		     /translation="MGGKWSKSSIIGWPAIRERMRRAEPAADGVGAASRDLEKHGAIT
		     TSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAGIDLSHFLKEKGGLEGLVW
		     SQKRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGE
		     DNILLHPMSLHGMEDAEKEVLVWRFDSKLAFHHVARELHPEYYKDC"
BASE COUNT	198 a	 126 c	  170 g    124 t
ORIGIN
       1 atgggtggca agtggtcaaa aagtagtata attggatggc ctgctataag ggaaagaatg 
      61 agacgagctg aaccagcagc agatggggtg ggagcagcat ctcgagacct agaaaaacat 
     121 ggagcaatca caactagcaa tacagcagct accaatgctg attgtgcctg gctagaagca 
     181 caagaggagg aggaagtggg ttttccagtc agacctcagg tacctttaag accaatgact 
     241 tacaaggcag gtatagatct tagccacttt ttaaaagaaa aggggggact ggaagggcta 
     301 gtttggtccc aaaaaagaca agatatcctt gatctgtgga tctaccacac acaaggctac 
     361 ttccctgatt ggcagaacta cacaccaggg ccagggatca gatatccact gacctttgga 
     421 tggtgcttca agctagtacc agttgagcca gataaggtag aagaggccaa tgaaggagag 
     481 gacaacatct tgttacaccc tatgagcctg catggaatgg aggacgcgga gaaagaagtg 
     541 ttagtgtgga gatttgacag caaactagcc ttccatcacg tagcccgaga gctgcatccg 
     601 gagtactaca aagactgc
//
last modified: Tue May 31 10:56 2022


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