HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AF027778		     648 bp    DNA     linear	VRL 02-APR-1998
DEFINITION  HIV-1 isolate C-499Env-I6C from USA, envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   AF027778
VERSION     AF027778.1 GI:2992573
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 648)
            Show all sequences for reference 1
  AUTHORS   Wei,Q. and Fultz,P.N.
  TITLE     Extensive diversification of human immunodeficiency virus type 1
	    subtype B strains during dual infection of a chimpanzee that
	    progressed to AIDS
  JOURNAL   J. Virol. 72 (4), 3005-3017 (1998)
  PUBMED    9525623
REFERENCE   2 (bases 1 to 648)
            Show all sequences for reference 2
  AUTHORS   Wei,Q. and Fultz,P.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-1997) Microbiology, University of Alabama at
	    Birmingham, BBRB 511, Birmingham, AL 35294-2170, USA
COMMENT     Sequence from chimpanzee C499 infected with strains SF2 and LAI.
FEATURES             Location/Qualifiers
     source	     1..648
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="C-499Env-I6C"
		     /db_xref="taxon:11676"
		     /note="from chimpanzees housed in the US"
     gene	     <1..>648
		     /gene="env"
     CDS	     <1..>648
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAC40625.1"
		     /db_xref="GI:2992574"
		     /translation="QLLLNGSLAEEEVVLRSANFTNNAKTIIVQLNHSVEITCTRPNY
		     NETKRIRIHRGYGRSFVTVRKLGDRKQAHCTMNGTKWDSALKQIANKLREQFNKTTII
		     FNRSSGGDLEIEMHSFNCGGELFYCNSTKLFNSTWNDTTESSGNGKNITLPCRIRQFV
		     NMWQRVGKAMYAPPSDGQIKCSSNITGLLLTRDGGPSGNKNETFRPGGGDMRDNWR"
BASE COUNT	254 a	 107 c	  138 g    149 t
ORIGIN
       1 caactgctgt taaatggcag tctagcagaa gaagaggtag tacttagatc tgccaatttc 
      61 acaaacaatg ctaaaaccat aatagtacag ctgaaccact ctgtagaaat tacttgtaca 
     121 agacccaact ataatgaaac aaaaagaatc cgtatccaca gaggatatgg aagatcattt 
     181 gttacagtaa gaaaattggg agataggaaa caagcacatt gtaccatgaa tggaacaaaa 
     241 tgggacagcg ctttaaaaca gatagctaac aaattaagag aacaatttaa taaaacaaca 
     301 ataatcttta accggtcctc aggaggggac ctagaaattg aaatgcacag ttttaattgt 
     361 ggaggggaat tgttctactg taattcaaca aaactgttta atagtacttg gaatgatact 
     421 acagagtcaa gtggcaatgg aaaaaatatc acactcccat gcagaataag acaatttgta 
     481 aacatgtggc agagagtagg aaaagcaatg tatgcccctc ccagcgatgg acaaattaaa 
     541 tgttcatcaa atattactgg gctactatta acaagagatg gtggtcctag tggtaacaag 
     601 aacgagacct tcagaccggg aggaggagat atgagggaca attggaga
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.