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LOCUS AB475198 183 bp RNA linear VRL 23-MAY-2009
DEFINITION Human immunodeficiency virus 1 gag gene for gag polyprotein,
partial cds, isolate: KI-078, clone: 01, HLA-B44 restricted CTL
epitopes region
ACCESSION AB475198
VERSION AB475198.1 GI:238003596
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1
Show all sequences for reference 1
AUTHORS Kawashima,Y., Pfafferott,K., Frater,J., Matthews,P., Payne,R.,
Addo,M., Gatanaga,H., Fujiwara,M., Hachiya,A., Koizumi,H., Kuse,N.,
Oka,S., Duda,A., Prendergast,A., Crawford,H., Leslie,A., Brumme,Z.,
Brumme,C., Allen,T., Brander,C., Kaslow,R., Tang,J., Hunter,E.,
Allen,S., Mulenga,J., Branch,S., Roach,T., John,M., Mallal,S.,
Ogwu,A., Shapiro,R., Prado,J.G., Fidler,S., Weber,J., Pybus,O.G.,
Klenerman,P., Ndung'u,T., Phillips,R., Heckerman,D.,
Harrigan,P.R., Walker,B.D., Takiguchi,M. and Goulder,P.
TITLE Adaptation of HIV-1 to human leukocyte antigen class I
JOURNAL Nature 458 (7238), 641-645 (2009)
PUBMED 19242411
REFERENCE 2 (bases 1 to 183)
Show all sequences for reference 2
AUTHORS Kawashima,Y., Naruto,T., Gatanaga,H., Hachiya,A., Koizumi,H.,
Kuse,N., Oka,S. and Takiguchi,M.
TITLE Direct Submission
JOURNAL Submitted (08-JAN-2009) Contact:Takuya Naruto Center for AIDS
Research, Kumamoto University, Viral Immunology; 2-2-1 Honjo,
Kumamoto, Kumamoto 860-0811, Japan
FEATURES Location/Qualifiers
source 1..183
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="KI-078"
/db_xref="taxon:11676"
/clone="01"
gene <1..>183
/gene="gag"
CDS <1..>183
/gene="gag"
/note="HLA-B44 restricted CTL epitopes region"
/codon_start="2"
/transl_table="1"
/product="gag polyprotein"
/protein_id="BAH59699.1"
/db_xref="GI:238003597"
/translation="LRAEQASQEVKNWMTETLLVQNSNPDCKTILKALGPAATLEEMM
TACQGVGGPSHKARILA"
BASE COUNT 67 a 35 c 45 g 36 t
ORIGIN
1 tctaagagcc gagcaagctt cacaggaggt aaaaaattgg atgacagaaa ccttgttggt
61 ccaaaattcg aacccagatt gtaagactat tttaaaagca ttgggaccag cagctacact
121 agaagaaatg atgacagcat gtcagggagt agggggaccc agccataaag caagaatctt
181 agc
//
last modified: Tue May 31 10:56 2022